BLASTX nr result

ID: Coptis25_contig00039790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039790
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879262.1| hypothetical protein ARALYDRAFT_902024 [Arab...   142   2e-32
ref|XP_002302528.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002280629.1| PREDICTED: uncharacterized protein LOC100250...   131   6e-29
ref|XP_003518342.1| PREDICTED: uncharacterized protein LOC100780...   131   7e-29
ref|XP_002511684.1| conserved hypothetical protein [Ricinus comm...   131   7e-29

>ref|XP_002879262.1| hypothetical protein ARALYDRAFT_902024 [Arabidopsis lyrata subsp.
           lyrata] gi|297325101|gb|EFH55521.1| hypothetical protein
           ARALYDRAFT_902024 [Arabidopsis lyrata subsp. lyrata]
          Length = 420

 Score =  142 bits (359), Expect = 2e-32
 Identities = 75/141 (53%), Positives = 89/141 (63%)
 Frame = -1

Query: 539 PLDALIQYPNSEFARFCILKYMLVVHSKMELSFFGNLDQRNLVIQGGHPRTLFYQIFVKM 360
           PLDAL  +PNS F+RFC  KY+LVVH  ME SFFGN+D R LV+ G HPRT+FY IF KM
Sbjct: 284 PLDALTAFPNSAFSRFCGQKYLLVVHPSMEASFFGNMDMRGLVLLGKHPRTMFYHIFAKM 343

Query: 359 AKWVWLLGVIGASMDTNVEIFGVERGSAFSEDHMENVVEDESDITYHHRHNFEESDXXXX 180
           AKWVW+LG   AS+D   +IF V RG+ FS  +ME+VV DE           EE      
Sbjct: 344 AKWVWILGSFAASLDLKAKIFVVRRGTRFSGVYMESVVGDEK----------EEGQGDLS 393

Query: 179 XXXXXXXGFKVGCSVIKSRVY 117
                  GFK+G SV KS+VY
Sbjct: 394 VEFITMPGFKIGDSVFKSQVY 414


>ref|XP_002302528.1| predicted protein [Populus trichocarpa] gi|222844254|gb|EEE81801.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  132 bits (332), Expect = 3e-29
 Identities = 71/141 (50%), Positives = 93/141 (65%)
 Frame = -1

Query: 539 PLDALIQYPNSEFARFCILKYMLVVHSKMELSFFGNLDQRNLVIQGGHPRTLFYQIFVKM 360
           PLD L Q P+S F +FC  KY++VVH KME SFFGNLDQRN +  GGHPRT FYQ+F+K+
Sbjct: 283 PLDMLGQNPDSAFGKFCRSKYLVVVHPKMEASFFGNLDQRNYINGGGHPRTPFYQVFLKL 342

Query: 359 AKWVWLLGVIGASMDTNVEIFGVERGSAFSEDHMENVVEDESDITYHHRHNFEESDXXXX 180
           AK +WLL  +  S D NV++F V+RG+ FSE +ME+VV++            +E+D    
Sbjct: 343 AKSIWLLHRLAYSFDPNVKVFQVKRGNEFSEVYMESVVKNLI---------LDENDPKPR 393

Query: 179 XXXXXXXGFKVGCSVIKSRVY 117
                  GF +G SVI+SRVY
Sbjct: 394 VGLMVMPGFWIGGSVIQSRVY 414


>ref|XP_002280629.1| PREDICTED: uncharacterized protein LOC100250526 isoform 2 [Vitis
           vinifera] gi|225453997|ref|XP_002280612.1| PREDICTED:
           uncharacterized protein LOC100250526 isoform 1 [Vitis
           vinifera]
          Length = 422

 Score =  131 bits (330), Expect = 6e-29
 Identities = 72/141 (51%), Positives = 92/141 (65%)
 Frame = -1

Query: 539 PLDALIQYPNSEFARFCILKYMLVVHSKMELSFFGNLDQRNLVIQGGHPRTLFYQIFVKM 360
           PLD L Q P+S F +FC  KY++VVH KM+ SFFGNLDQRN V+ GGHPRT FYQ F+K+
Sbjct: 283 PLDTLGQNPDSIFGKFCRSKYLVVVHPKMDASFFGNLDQRNYVMGGGHPRTPFYQAFLKL 342

Query: 359 AKWVWLLGVIGASMDTNVEIFGVERGSAFSEDHMENVVEDESDITYHHRHNFEESDXXXX 180
           AK +WLL  +  S D NV++F V+RGS FSE +ME+VV++            +ESD    
Sbjct: 343 AKSIWLLHRLAYSFDPNVKVFQVKRGSEFSEVYMESVVKNLV---------MDESDEKPK 393

Query: 179 XXXXXXXGFKVGCSVIKSRVY 117
                  GF +G SVI+ RVY
Sbjct: 394 VGLMVMPGFWIGGSVIQCRVY 414


>ref|XP_003518342.1| PREDICTED: uncharacterized protein LOC100780385 [Glycine max]
          Length = 446

 Score =  131 bits (329), Expect = 7e-29
 Identities = 68/141 (48%), Positives = 87/141 (61%)
 Frame = -1

Query: 539 PLDALIQYPNSEFARFCILKYMLVVHSKMELSFFGNLDQRNLVIQGGHPRTLFYQIFVKM 360
           P DAL++ P+S+FA+FC  KY+LVVH KME SFFGNLD R  ++ G HPRT FYQ+F KM
Sbjct: 302 PFDALMENPHSDFAKFCQAKYLLVVHPKMEESFFGNLDHRTFIMSGKHPRTEFYQLFAKM 361

Query: 359 AKWVWLLGVIGASMDTNVEIFGVERGSAFSEDHMENVVEDESDITYHHRHNFEESDXXXX 180
           AKWVW+L     S+D    +F V RGSAFS   ME+V E++           +E      
Sbjct: 362 AKWVWVLLGYAVSIDPEATLFSVSRGSAFSSLFMESVEEEKESAILSDE---DEERATHK 418

Query: 179 XXXXXXXGFKVGCSVIKSRVY 117
                  GF++G  V+KSRVY
Sbjct: 419 VQFMIMPGFQIGNMVVKSRVY 439


>ref|XP_002511684.1| conserved hypothetical protein [Ricinus communis]
           gi|223548864|gb|EEF50353.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 421

 Score =  131 bits (329), Expect = 7e-29
 Identities = 70/141 (49%), Positives = 92/141 (65%)
 Frame = -1

Query: 539 PLDALIQYPNSEFARFCILKYMLVVHSKMELSFFGNLDQRNLVIQGGHPRTLFYQIFVKM 360
           PLD L Q P+S F +FC  KY++VVH KME SFFGNLDQRN ++ GGHPRT FYQ F+K+
Sbjct: 283 PLDVLGQNPDSSFGKFCRSKYLVVVHPKMEASFFGNLDQRNYIMGGGHPRTPFYQAFLKL 342

Query: 359 AKWVWLLGVIGASMDTNVEIFGVERGSAFSEDHMENVVEDESDITYHHRHNFEESDXXXX 180
           AK +WLL ++  S D NV++F V+RGS FSE +ME+VV          ++   + +    
Sbjct: 343 AKSIWLLHMLAFSFDPNVKVFQVKRGSEFSEVYMESVV----------KNLILDENQKPR 392

Query: 179 XXXXXXXGFKVGCSVIKSRVY 117
                  GF +G SVI+SRVY
Sbjct: 393 VGLMVMPGFWIGGSVIQSRVY 413


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