BLASTX nr result

ID: Coptis25_contig00039775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039775
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndr...   330   1e-88
ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel...   328   5e-88
ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent hel...   328   7e-88
emb|CBI15784.3| unnamed protein product [Vitis vinifera]              325   3e-87
ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent hel...   323   1e-86

>ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
           helicase homolog [Glycine max]
          Length = 920

 Score =  330 bits (846), Expect = 1e-88
 Identities = 156/216 (72%), Positives = 183/216 (84%), Gaps = 1/216 (0%)
 Frame = -3

Query: 647 HGQMSGKDREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQESGR 468
           HGQM+GK REESHR F+RDE+ VMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQESGR
Sbjct: 264 HGQMNGKAREESHRLFVRDELQVMVATIAFGMGIDKPNIRQVIHYGCPKSLESYYQESGR 323

Query: 467 CGRDGLASICWLYYTRSDFAKADFFCGESQG-IQREAIIESLMAAQKYCLLTSCRRKFLL 291
           CGRDG+AS+CWLYYTRSDFAK DF+CGE +   QR+AI+ESL+AA++YC+LT+CRRKFLL
Sbjct: 324 CGRDGIASVCWLYYTRSDFAKGDFYCGEVKSEKQRKAIMESLLAAERYCVLTTCRRKFLL 383

Query: 290 EYFGEKSASSXXXXXXXXXNIKKERDMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSK 111
           EYFGEK  +            +KERDMSRE +LLM+CI SC G WGLNMPIDVLRGSRSK
Sbjct: 384 EYFGEKFPADRCGNCDNCKISRKERDMSREAFLLMACIHSCRGGWGLNMPIDVLRGSRSK 443

Query: 110 KVIENQYDKLPLHGLGKYFSSDCWKALADQLISKGY 3
           K+++ Q+DKLPLHGLGK + ++ WKAL  QLIS+GY
Sbjct: 444 KILDVQFDKLPLHGLGKNYPANWWKALGYQLISQGY 479


>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
           vinifera]
          Length = 913

 Score =  328 bits (841), Expect = 5e-88
 Identities = 155/215 (72%), Positives = 177/215 (82%)
 Frame = -3

Query: 647 HGQMSGKDREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQESGR 468
           HGQM+   REESHR FIRDEVHVMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQESGR
Sbjct: 259 HGQMANSAREESHRIFIRDEVHVMVATIAFGMGIDKPNIRHVIHYGCPKSLESYYQESGR 318

Query: 467 CGRDGLASICWLYYTRSDFAKADFFCGESQGIQREAIIESLMAAQKYCLLTSCRRKFLLE 288
           CGRDG+AS+CWLYY R DF KADF+CGE+ G QR AI++SL+AAQ YCL T+CRRKFLLE
Sbjct: 319 CGRDGIASVCWLYYNRGDFMKADFYCGEATGNQRRAIMDSLVAAQNYCLQTTCRRKFLLE 378

Query: 287 YFGEKSASSXXXXXXXXXNIKKERDMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKK 108
           YFGEK  S            K+E DMSRE +LL++CI SC G WGLNMPID+LRGSRSK+
Sbjct: 379 YFGEKFESDKCGNCDNCTISKRECDMSREAFLLIACINSCRGHWGLNMPIDILRGSRSKR 438

Query: 107 VIENQYDKLPLHGLGKYFSSDCWKALADQLISKGY 3
           +++ ++DKLPLHGLGK  SS+ WKALA QLIS GY
Sbjct: 439 ILDAKFDKLPLHGLGKDHSSNWWKALAYQLISYGY 473


>ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
           max]
          Length = 920

 Score =  328 bits (840), Expect = 7e-88
 Identities = 154/216 (71%), Positives = 183/216 (84%), Gaps = 1/216 (0%)
 Frame = -3

Query: 647 HGQMSGKDREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQESGR 468
           HGQM+GK REESHR F+RDE+ VMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQESGR
Sbjct: 264 HGQMNGKAREESHRLFVRDELQVMVATIAFGMGIDKPNIRQVIHYGCPKSLESYYQESGR 323

Query: 467 CGRDGLASICWLYYTRSDFAKADFFCGESQG-IQREAIIESLMAAQKYCLLTSCRRKFLL 291
           CGRDG+AS+CWLYYTRSDFAK DF+CG+ +   QR+AI+ESL+AA++YC+LT+CRRKFLL
Sbjct: 324 CGRDGIASVCWLYYTRSDFAKGDFYCGDVKSEKQRKAIMESLLAAERYCVLTTCRRKFLL 383

Query: 290 EYFGEKSASSXXXXXXXXXNIKKERDMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSK 111
           EYFGEK  +            +KERDMSRE +LLM+CI SC G WGLNMPIDVLRGSR+K
Sbjct: 384 EYFGEKFPADRCGNCDNCKISRKERDMSREAFLLMACIHSCRGIWGLNMPIDVLRGSRAK 443

Query: 110 KVIENQYDKLPLHGLGKYFSSDCWKALADQLISKGY 3
           K+++ Q+DKLPLHGLGK + ++ WKAL  QLIS+GY
Sbjct: 444 KILDVQFDKLPLHGLGKNYPANWWKALRHQLISQGY 479


>emb|CBI15784.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  325 bits (834), Expect = 3e-87
 Identities = 154/214 (71%), Positives = 176/214 (82%)
 Frame = -3

Query: 647 HGQMSGKDREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQESGR 468
           HGQM+   REESHR FIRDEVHVMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQESGR
Sbjct: 259 HGQMANSAREESHRIFIRDEVHVMVATIAFGMGIDKPNIRHVIHYGCPKSLESYYQESGR 318

Query: 467 CGRDGLASICWLYYTRSDFAKADFFCGESQGIQREAIIESLMAAQKYCLLTSCRRKFLLE 288
           CGRDG+AS+CWLYY R DF KADF+CGE+ G QR AI++SL+AAQ YCL T+CRRKFLLE
Sbjct: 319 CGRDGIASVCWLYYNRGDFMKADFYCGEATGNQRRAIMDSLVAAQNYCLQTTCRRKFLLE 378

Query: 287 YFGEKSASSXXXXXXXXXNIKKERDMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKK 108
           YFGEK  S            K+E DMSRE +LL++CI SC G WGLNMPID+LRGSRSK+
Sbjct: 379 YFGEKFESDKCGNCDNCTISKRECDMSREAFLLIACINSCRGHWGLNMPIDILRGSRSKR 438

Query: 107 VIENQYDKLPLHGLGKYFSSDCWKALADQLISKG 6
           +++ ++DKLPLHGLGK  SS+ WKALA QLIS G
Sbjct: 439 ILDAKFDKLPLHGLGKDHSSNWWKALAYQLISYG 472


>ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cucumis
           sativus]
          Length = 919

 Score =  323 bits (829), Expect = 1e-86
 Identities = 154/215 (71%), Positives = 177/215 (82%), Gaps = 1/215 (0%)
 Frame = -3

Query: 647 HGQMSGKDREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQESGR 468
           HGQM  K R ESHR FIRDE+ VMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQESGR
Sbjct: 259 HGQMDKKSRAESHRLFIRDELQVMVATIAFGMGIDKPNIRQVIHYGCPKSLESYYQESGR 318

Query: 467 CGRDGLASICWLYYTRSDFAKADFFCGESQ-GIQREAIIESLMAAQKYCLLTSCRRKFLL 291
           CGRDG+AS+CWLYYTRSDFAKADF+CGESQ   QR AI ESLMAAQ+YC + +CRR FLL
Sbjct: 319 CGRDGIASVCWLYYTRSDFAKADFYCGESQTENQRRAIRESLMAAQQYCSIATCRRNFLL 378

Query: 290 EYFGEKSASSXXXXXXXXXNIKKERDMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSK 111
            YFGE+  S            KKERDMS+E +LL++CI SC G+WGLNMP+D+LRGSR+K
Sbjct: 379 GYFGERFHSDKCGNCDNCIVSKKERDMSKEAFLLLACIQSCRGKWGLNMPVDILRGSRAK 438

Query: 110 KVIENQYDKLPLHGLGKYFSSDCWKALADQLISKG 6
           K+++ Q+DKLPLHGLGK +SS+ WKALA QLIS G
Sbjct: 439 KILDTQFDKLPLHGLGKEYSSNWWKALASQLISNG 473


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