BLASTX nr result
ID: Coptis25_contig00039775
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00039775 (649 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndr... 330 1e-88 ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel... 328 5e-88 ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent hel... 328 7e-88 emb|CBI15784.3| unnamed protein product [Vitis vinifera] 325 3e-87 ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent hel... 323 1e-86 >ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent helicase homolog [Glycine max] Length = 920 Score = 330 bits (846), Expect = 1e-88 Identities = 156/216 (72%), Positives = 183/216 (84%), Gaps = 1/216 (0%) Frame = -3 Query: 647 HGQMSGKDREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQESGR 468 HGQM+GK REESHR F+RDE+ VMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQESGR Sbjct: 264 HGQMNGKAREESHRLFVRDELQVMVATIAFGMGIDKPNIRQVIHYGCPKSLESYYQESGR 323 Query: 467 CGRDGLASICWLYYTRSDFAKADFFCGESQG-IQREAIIESLMAAQKYCLLTSCRRKFLL 291 CGRDG+AS+CWLYYTRSDFAK DF+CGE + QR+AI+ESL+AA++YC+LT+CRRKFLL Sbjct: 324 CGRDGIASVCWLYYTRSDFAKGDFYCGEVKSEKQRKAIMESLLAAERYCVLTTCRRKFLL 383 Query: 290 EYFGEKSASSXXXXXXXXXNIKKERDMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSK 111 EYFGEK + +KERDMSRE +LLM+CI SC G WGLNMPIDVLRGSRSK Sbjct: 384 EYFGEKFPADRCGNCDNCKISRKERDMSREAFLLMACIHSCRGGWGLNMPIDVLRGSRSK 443 Query: 110 KVIENQYDKLPLHGLGKYFSSDCWKALADQLISKGY 3 K+++ Q+DKLPLHGLGK + ++ WKAL QLIS+GY Sbjct: 444 KILDVQFDKLPLHGLGKNYPANWWKALGYQLISQGY 479 >ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis vinifera] Length = 913 Score = 328 bits (841), Expect = 5e-88 Identities = 155/215 (72%), Positives = 177/215 (82%) Frame = -3 Query: 647 HGQMSGKDREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQESGR 468 HGQM+ REESHR FIRDEVHVMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQESGR Sbjct: 259 HGQMANSAREESHRIFIRDEVHVMVATIAFGMGIDKPNIRHVIHYGCPKSLESYYQESGR 318 Query: 467 CGRDGLASICWLYYTRSDFAKADFFCGESQGIQREAIIESLMAAQKYCLLTSCRRKFLLE 288 CGRDG+AS+CWLYY R DF KADF+CGE+ G QR AI++SL+AAQ YCL T+CRRKFLLE Sbjct: 319 CGRDGIASVCWLYYNRGDFMKADFYCGEATGNQRRAIMDSLVAAQNYCLQTTCRRKFLLE 378 Query: 287 YFGEKSASSXXXXXXXXXNIKKERDMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKK 108 YFGEK S K+E DMSRE +LL++CI SC G WGLNMPID+LRGSRSK+ Sbjct: 379 YFGEKFESDKCGNCDNCTISKRECDMSREAFLLIACINSCRGHWGLNMPIDILRGSRSKR 438 Query: 107 VIENQYDKLPLHGLGKYFSSDCWKALADQLISKGY 3 +++ ++DKLPLHGLGK SS+ WKALA QLIS GY Sbjct: 439 ILDAKFDKLPLHGLGKDHSSNWWKALAYQLISYGY 473 >ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine max] Length = 920 Score = 328 bits (840), Expect = 7e-88 Identities = 154/216 (71%), Positives = 183/216 (84%), Gaps = 1/216 (0%) Frame = -3 Query: 647 HGQMSGKDREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQESGR 468 HGQM+GK REESHR F+RDE+ VMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQESGR Sbjct: 264 HGQMNGKAREESHRLFVRDELQVMVATIAFGMGIDKPNIRQVIHYGCPKSLESYYQESGR 323 Query: 467 CGRDGLASICWLYYTRSDFAKADFFCGESQG-IQREAIIESLMAAQKYCLLTSCRRKFLL 291 CGRDG+AS+CWLYYTRSDFAK DF+CG+ + QR+AI+ESL+AA++YC+LT+CRRKFLL Sbjct: 324 CGRDGIASVCWLYYTRSDFAKGDFYCGDVKSEKQRKAIMESLLAAERYCVLTTCRRKFLL 383 Query: 290 EYFGEKSASSXXXXXXXXXNIKKERDMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSK 111 EYFGEK + +KERDMSRE +LLM+CI SC G WGLNMPIDVLRGSR+K Sbjct: 384 EYFGEKFPADRCGNCDNCKISRKERDMSREAFLLMACIHSCRGIWGLNMPIDVLRGSRAK 443 Query: 110 KVIENQYDKLPLHGLGKYFSSDCWKALADQLISKGY 3 K+++ Q+DKLPLHGLGK + ++ WKAL QLIS+GY Sbjct: 444 KILDVQFDKLPLHGLGKNYPANWWKALRHQLISQGY 479 >emb|CBI15784.3| unnamed protein product [Vitis vinifera] Length = 969 Score = 325 bits (834), Expect = 3e-87 Identities = 154/214 (71%), Positives = 176/214 (82%) Frame = -3 Query: 647 HGQMSGKDREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQESGR 468 HGQM+ REESHR FIRDEVHVMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQESGR Sbjct: 259 HGQMANSAREESHRIFIRDEVHVMVATIAFGMGIDKPNIRHVIHYGCPKSLESYYQESGR 318 Query: 467 CGRDGLASICWLYYTRSDFAKADFFCGESQGIQREAIIESLMAAQKYCLLTSCRRKFLLE 288 CGRDG+AS+CWLYY R DF KADF+CGE+ G QR AI++SL+AAQ YCL T+CRRKFLLE Sbjct: 319 CGRDGIASVCWLYYNRGDFMKADFYCGEATGNQRRAIMDSLVAAQNYCLQTTCRRKFLLE 378 Query: 287 YFGEKSASSXXXXXXXXXNIKKERDMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSKK 108 YFGEK S K+E DMSRE +LL++CI SC G WGLNMPID+LRGSRSK+ Sbjct: 379 YFGEKFESDKCGNCDNCTISKRECDMSREAFLLIACINSCRGHWGLNMPIDILRGSRSKR 438 Query: 107 VIENQYDKLPLHGLGKYFSSDCWKALADQLISKG 6 +++ ++DKLPLHGLGK SS+ WKALA QLIS G Sbjct: 439 ILDAKFDKLPLHGLGKDHSSNWWKALAYQLISYG 472 >ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cucumis sativus] Length = 919 Score = 323 bits (829), Expect = 1e-86 Identities = 154/215 (71%), Positives = 177/215 (82%), Gaps = 1/215 (0%) Frame = -3 Query: 647 HGQMSGKDREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQESGR 468 HGQM K R ESHR FIRDE+ VMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQESGR Sbjct: 259 HGQMDKKSRAESHRLFIRDELQVMVATIAFGMGIDKPNIRQVIHYGCPKSLESYYQESGR 318 Query: 467 CGRDGLASICWLYYTRSDFAKADFFCGESQ-GIQREAIIESLMAAQKYCLLTSCRRKFLL 291 CGRDG+AS+CWLYYTRSDFAKADF+CGESQ QR AI ESLMAAQ+YC + +CRR FLL Sbjct: 319 CGRDGIASVCWLYYTRSDFAKADFYCGESQTENQRRAIRESLMAAQQYCSIATCRRNFLL 378 Query: 290 EYFGEKSASSXXXXXXXXXNIKKERDMSREVYLLMSCIGSCGGRWGLNMPIDVLRGSRSK 111 YFGE+ S KKERDMS+E +LL++CI SC G+WGLNMP+D+LRGSR+K Sbjct: 379 GYFGERFHSDKCGNCDNCIVSKKERDMSKEAFLLLACIQSCRGKWGLNMPVDILRGSRAK 438 Query: 110 KVIENQYDKLPLHGLGKYFSSDCWKALADQLISKG 6 K+++ Q+DKLPLHGLGK +SS+ WKALA QLIS G Sbjct: 439 KILDTQFDKLPLHGLGKEYSSNWWKALASQLISNG 473