BLASTX nr result
ID: Coptis25_contig00039773
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00039773 (384 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631173.1| PREDICTED: LOW QUALITY PROTEIN: glucan endo-... 79 5e-13 emb|CBI26850.3| unnamed protein product [Vitis vinifera] 79 5e-13 ref|XP_002312452.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-10 ref|XP_002314794.1| predicted protein [Populus trichocarpa] gi|2... 69 5e-10 gb|AAK85402.2| beta-1,3-glucanase [Camellia sinensis] 68 7e-10 >ref|XP_003631173.1| PREDICTED: LOW QUALITY PROTEIN: glucan endo-1,3-beta-glucosidase 3-like [Vitis vinifera] Length = 538 Score = 78.6 bits (192), Expect = 5e-13 Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 2/67 (2%) Frame = +3 Query: 6 ISTTDPSHSSCLFPGSGGRNGTFLNSTTLAPSSNSTASGSIPLLYRVN--VRSFLVIGGL 179 I+TTDPSH SC FPGS GRN TF+N T+LAPSSNST+SGS + + + S ++IG L Sbjct: 472 ITTTDPSHGSCKFPGSAGRNNTFINGTSLAPSSNSTSSGSQSQYFYSSGALMSCMIIGIL 531 Query: 180 FWSAVFL 200 WSAV L Sbjct: 532 VWSAVLL 538 >emb|CBI26850.3| unnamed protein product [Vitis vinifera] Length = 498 Score = 78.6 bits (192), Expect = 5e-13 Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 2/67 (2%) Frame = +3 Query: 6 ISTTDPSHSSCLFPGSGGRNGTFLNSTTLAPSSNSTASGSIPLLYRVN--VRSFLVIGGL 179 I+TTDPSH SC FPGS GRN TF+N T+LAPSSNST+SGS + + + S ++IG L Sbjct: 432 ITTTDPSHGSCKFPGSAGRNNTFINGTSLAPSSNSTSSGSQSQYFYSSGALMSCMIIGIL 491 Query: 180 FWSAVFL 200 WSAV L Sbjct: 492 VWSAVLL 498 >ref|XP_002312452.1| predicted protein [Populus trichocarpa] gi|222852272|gb|EEE89819.1| predicted protein [Populus trichocarpa] Length = 479 Score = 70.1 bits (170), Expect = 2e-10 Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 2/67 (2%) Frame = +3 Query: 6 ISTTDPSHSSCLFPGSGGRNGTFLNSTTLAPSSNSTASG--SIPLLYRVNVRSFLVIGGL 179 I+TTDPSH SC+FPGS GRNG+ N+T+LAPSSNST SG S+ + + + ++IG L Sbjct: 413 ITTTDPSHGSCIFPGSAGRNGSLPNTTSLAPSSNSTTSGCHSVYIYGAGSFTTSVIIGVL 472 Query: 180 FWSAVFL 200 S FL Sbjct: 473 LMSVFFL 479 >ref|XP_002314794.1| predicted protein [Populus trichocarpa] gi|222863834|gb|EEF00965.1| predicted protein [Populus trichocarpa] Length = 493 Score = 68.6 bits (166), Expect = 5e-10 Identities = 36/67 (53%), Positives = 47/67 (70%), Gaps = 2/67 (2%) Frame = +3 Query: 6 ISTTDPSHSSCLFPGSGGRNGTFLNSTTLAPSSNSTASG--SIPLLYRVNVRSFLVIGGL 179 I+T+DPSH SC+FPGS GRNGTF N+T+LAPSSNS+ SG S+ + + ++IG L Sbjct: 427 ITTSDPSHGSCIFPGSAGRNGTFPNTTSLAPSSNSSTSGCHSVYFYGAGSFTTSVIIGVL 486 Query: 180 FWSAVFL 200 S V L Sbjct: 487 LMSMVCL 493 >gb|AAK85402.2| beta-1,3-glucanase [Camellia sinensis] Length = 495 Score = 68.2 bits (165), Expect = 7e-10 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 3/68 (4%) Frame = +3 Query: 6 ISTTDPSHSSCLFPGSGGRNGTFLNSTTLAPSSNSTASGSIPLLY---RVNVRSFLVIGG 176 I+TT+P+H SC+FPGS G+NGTFLNST APS NST+SG P Y + + + +G Sbjct: 431 ITTTNPTHGSCVFPGSNGKNGTFLNST--APSLNSTSSG-CPARYMRGSASASAIVAVGI 487 Query: 177 LFWSAVFL 200 L WS VFL Sbjct: 488 LSWSLVFL 495