BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039741
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus c...   114   6e-24
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...   100   2e-19
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    99   5e-19
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    96   2e-18

>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  124 bits (310), Expect = 1e-26
 Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
 Frame = -2

Query: 500 WNGALHFRTSEDCCLCLCFDVEKELFRTMPLPPIPVGREERRVDYLGASRDHLYLIQRFD 321
           WNGA+H+ ++    +   FD+++E   +MP  P      +RR  Y G S  HL+LI+ + 
Sbjct: 215 WNGAIHWISATGNAIY--FDMDRECISSMPKLPFSYEWGKRRFRYFGESDGHLHLIEIYG 272

Query: 320 YGNKLY-ILDMERDYSCWKVRYEMNLTTITTAYPEMIRHYLGTLDWNYYAFSVLLVQGE- 147
                + + +ME+DYS W++RY + L  +  A+PEM+R YL   D NYYAF VL +  E 
Sbjct: 273 LRTTQFNVYEMEKDYSFWRIRYRVQLDHVVAAFPEMVRSYLDAGDSNYYAFVVLSLVEED 332

Query: 146 -TETPCVLLHVPGKIILYNHKDETFETLREFS--TGVHETGPFLQYAWFDS 3
            TE   +LLH+PGK+I YN K++TF+ + E S  TG   T   LQ+ W D+
Sbjct: 333 ATEESSLLLHIPGKVISYNLKNKTFKKVCELSYGTGGSRTKESLQFGWLDA 383


>ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus communis]
           gi|223550115|gb|EEF51602.1| hypothetical protein
           RCOM_1501190 [Ricinus communis]
          Length = 332

 Score =  114 bits (286), Expect = 6e-24
 Identities = 66/171 (38%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
 Frame = -2

Query: 500 WNGALHFRTSEDCCLCLCFDVEKELFRTMPLPPIPVGREERRVDYLGASRDHLYLIQRFD 321
           WNGA+H+ T  D     CFDV++E  R MP+PPIP     RRV Y G S  HL LI+ + 
Sbjct: 153 WNGAIHWYT--DSGPSFCFDVDQEQIREMPMPPIPDDWYRRRVIYFGESGGHLNLIEIYH 210

Query: 320 Y-GNKLYILDMERDYSCWKVRYEMNLTTITTAYPEMIRHYLGTLDWNYYAFSV-LLVQGE 147
           +   +  + ++ +DYS W V+Y + L  +  A+PEMI+        NYYA+ +  +V+GE
Sbjct: 211 HAATQFNVCELAKDYSGWFVKYRIELEEVIIAFPEMIKTQFEPTVLNYYAYEIWCIVRGE 270

Query: 146 T-ETPCVLLHVPGKIILYNHKDETFETLREF-----STGVHETGPFLQYAW 12
           + E   ++LH+P KII YN K ++F+ L +F     +TG HE    + + W
Sbjct: 271 SDENSYMVLHMPAKIIRYNLKGKSFKKLCDFPPDSGATGFHEDA--MNFRW 319


>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
           gi|222864409|gb|EEF01540.1| f-box family protein
           [Populus trichocarpa]
          Length = 406

 Score =  100 bits (248), Expect = 2e-19
 Identities = 65/170 (38%), Positives = 95/170 (55%), Gaps = 8/170 (4%)
 Frame = -2

Query: 497 NGALHFRTSEDCCLCLCFDVEKELFRTMPLPPIPVGREERRVDYLGASRDHLYLIQRFDY 318
           N ALH+ +     L L FD+E+E   TMP+PPIP GR ERR+ Y G S  HL LI+ +  
Sbjct: 229 NRALHWISRG--ALALRFDIEQERMLTMPMPPIPEGRSERRLGYFGESGGHLCLIEIYGP 286

Query: 317 GNKLY-ILDMERDYSCWKVRYEMNLTTITTAYPEMIRHYLGTLDWNYYAFSVLLVQ---- 153
               + ++ ME DYS W VRY ++L+ I +++P M R+     D + Y FS+L +     
Sbjct: 287 ITTCFDVMRMESDYSGWSVRYRVDLSRIASSFPSMARN--NVQDIHRYLFSILHLADRSQ 344

Query: 152 -GETETPCVLLHVPGKIILYNHKDETFETLREFSTGVH--ETGPFLQYAW 12
            GE E+  + LH+PG  I YN KD  +  L+     ++  E G  L ++W
Sbjct: 345 VGEDES-SMWLHIPGTFISYNLKDGKWSKLQSILHQINKIEEGMGLWHSW 393


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/147 (36%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
 Frame = -2

Query: 500 WNGALHFRTSEDCCLCLCFDVEKELFRTMPLPPIPVGREERRVDYLGASRDHLYLIQRFD 321
           WNGA+H+ +  +  L   FD+ +EL R MP+PP+P    ER +   G S  HL+L++ ++
Sbjct: 207 WNGAIHWISPREASLY--FDLNEELVREMPMPPVPDDSNERGIRCFGESCGHLHLVEIYE 264

Query: 320 YGNKLY-ILDMERDYSCWKVRYEMNLTTITTAYPEMIRHYLGTLDWNYYAFSVL-LVQGE 147
                + + +MERD+S W V++ ++L  +  A+P +I  Y    D+  Y+FSVL +V+ E
Sbjct: 265 SSTTQFNVYEMERDHSGWFVKFRVDLNGVALAFPGIIEGYHEEYDY-MYSFSVLCIVRRE 323

Query: 146 TETPCVL-LHVPGKIILYNHKDETFET 69
            E    L LH+PGK+I YN   ++++T
Sbjct: 324 KEEDSFLALHIPGKVIGYNFSSKSYQT 350


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 56/156 (35%), Positives = 91/156 (58%), Gaps = 5/156 (3%)
 Frame = -2

Query: 500 WNGALHFRTSEDCCLCLCFDVEKELFRTMPLPPI-PVGREERRVDYLGASRDHLYLIQRF 324
           WNGA+H+ +     L   F +++    TMP PP  P G  +RR+ + G S  HL++I+ +
Sbjct: 233 WNGAVHWISPSGASLY--FGIDEGRIDTMPPPPPGPGGWGKRRIRHFGESGGHLHIIEIY 290

Query: 323 DYGNKLYIL-DMERDYSCWKVRYEMNLTTITTAYPEMIRHYLGTLDWNYYAFSVLLV--- 156
                 +++ +MERDYS W VR+ ++L  +  A+PE+ ++YL   D  YYA++VL +   
Sbjct: 291 GPRTTQFVVYEMERDYSNWGVRFSVDLDKVIAAFPEITQNYLDAHDLYYYAYNVLCLIRG 350

Query: 155 QGETETPCVLLHVPGKIILYNHKDETFETLREFSTG 48
            G  E   +LL + GKII YN KD +F+ + + + G
Sbjct: 351 GGNEEDFSLLLQIRGKIICYNIKDGSFKNVYDVAHG 386