BLASTX nr result

ID: Coptis25_contig00039737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039737
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    70   2e-10
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                69   5e-10
ref|NP_001058526.1| Os06g0707300 [Oryza sativa Japonica Group] g...    68   1e-09
gb|EAY81397.1| hypothetical protein OsI_36568 [Oryza sativa Indi...    67   3e-09
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    65   1e-08

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 50/146 (34%), Positives = 68/146 (46%)
 Frame = -2

Query: 439  TFATNTSNIPDDILISIATRLHSLIDVFHFSQVCKSWNSVTLSSPLINKFRIPQSPLLLL 260
            T   + S +PDD L  IA +LHS+ D   F  VCKSW S+             +SP L+L
Sbjct: 917  TVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSS--KSPWLML 974

Query: 259  AESKKETHQIQTNGEEEGDDPVFRRQFVGLNDEDCVYELHLPELYQNRCIGSIGNWLITV 80
            AE +        N E  G    F     G      VYE+ LPE+    C GS   WL+T+
Sbjct: 975  AEKE--------NSEIRG----FYSPLSGK-----VYEIRLPEVVGKWCWGSPYGWLVTI 1017

Query: 79   NKEVEFHIFNPFSRTQLSLPSQSTLP 2
              +++  + NP +R Q+ LPS    P
Sbjct: 1018 GTDLDMCLLNPLTRVQILLPSLRACP 1043


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 45/138 (32%), Positives = 73/138 (52%)
 Frame = -2

Query: 421 SNIPDDILISIATRLHSLIDVFHFSQVCKSWNSVTLSSPLINKFRIPQSPLLLLAESKKE 242
           S +  D+L+SI   L+ + D  +F +VCKSW+SV   +   N   + ++P L+LAE    
Sbjct: 5   SELQLDLLVSIGRCLNLIEDYLNFGRVCKSWHSVATKANFNND--LCRAPWLMLAE---- 58

Query: 241 THQIQTNGEEEGDDPVFRRQFVGLNDEDCVYELHLPELYQNRCIGSIGNWLITVNKEVEF 62
                   EE+ +   F   + G+     +    +P+  + RC+ S+G WLITV +E E 
Sbjct: 59  --------EEDNEVRKFFSLYNGM-----ILNKRIPKASRKRCLESMG-WLITVGEEGEI 104

Query: 61  HIFNPFSRTQLSLPSQST 8
            + +PFS  Q+ LP Q+T
Sbjct: 105 SLLHPFSDVQIELPHQNT 122


>ref|NP_001058526.1| Os06g0707300 [Oryza sativa Japonica Group]
           gi|53792591|dbj|BAD53606.1| unknown protein [Oryza
           sativa Japonica Group] gi|53792784|dbj|BAD53819.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113596566|dbj|BAF20440.1| Os06g0707300 [Oryza sativa
           Japonica Group] gi|125556699|gb|EAZ02305.1| hypothetical
           protein OsI_24405 [Oryza sativa Indica Group]
           gi|215715330|dbj|BAG95081.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 472

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
 Frame = -2

Query: 421 SNIPDDILISIATRLHSLIDVFHFSQVCKSWNSVTLSSPLINKFRIPQSPLLLLAESKKE 242
           +++P D+L S+  RL  + D   F  VC +W S   +S    +FR  Q P L+L  +   
Sbjct: 17  ADLPRDLLESVLGRL-PVPDRLRFPGVCTAWQSADAASATA-RFRAAQPPWLMLPFNPTA 74

Query: 241 THQIQTNGEEEGDDPVFRRQFVGLNDEDC-VYELHLPELYQNRCIGSIGNWLITVNKEVE 65
             Q  + G   GD      +F+ L+D          P + +  C+GS   WL+T +   E
Sbjct: 75  RRQSPSGGGG-GDGRFLEARFLSLSDGRAYAIPQPAPPVSERLCVGSSDGWLVTADAASE 133

Query: 64  FHIFNPFSRTQLSLPSQSTLP 2
            H+ NP +  Q+ LPS +TLP
Sbjct: 134 LHLLNPLTGAQVQLPSVTTLP 154


>gb|EAY81397.1| hypothetical protein OsI_36568 [Oryza sativa Indica Group]
          Length = 458

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
 Frame = -2

Query: 472 SRQEEKSFTMDTFATNTSNIPDDILISIATRLHSLIDVFHFSQVCKSWNSVTLSSPLINK 293
           +++E ++   +T A   S++P DIL+ I   L  + D    + VC SW SV +    + K
Sbjct: 36  TKEELRTILTETTAREFSDLPHDILMDIIAMLE-IPDALRAASVCSSWRSVHIKLHNLGK 94

Query: 292 FRIPQSPLLLLAESKKETHQIQTNGEEEGDDPVFRRQFVGLN-------DEDCVYELHLP 134
           ++ PQ+P  L                       +  Q +G N        E   Y+L LP
Sbjct: 95  YKRPQTPCFL-----------------------YTSQSIGENIACLYSLAEKRTYKLTLP 131

Query: 133 E--LYQNRCIGSIGNWLITVNKEVEFHIFNPFSRTQLSLPSQSTL 5
           E  + +   +GS   WL+T ++  E HI NP +  Q++LPS  T+
Sbjct: 132 EPPISRRYLLGSSDGWLVTADERSEMHILNPITGEQIALPSVITI 176


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 44/138 (31%), Positives = 63/138 (45%)
 Frame = -2

Query: 421 SNIPDDILISIATRLHSLIDVFHFSQVCKSWNSVTLSSPLINKFRIPQSPLLLLAESKKE 242
           + +P ++L  IA +  + +D      VC SW S     P  +   + Q P LLL      
Sbjct: 6   AELPPELLQVIADKHTNYVDYLVTRAVCGSWQSAIAKRP--HNHLLCQLPFLLLP----- 58

Query: 241 THQIQTNGEEEGDDPVFRRQFVGLNDEDCVYELHLPELYQNRCIGSIGNWLITVNKEVEF 62
               Q N +        RR F  ++D D +Y L LPE Y+ RC GS   WLI V      
Sbjct: 59  --YYQNNPD--------RRGFYNISD-DKIYVLELPEAYEKRCCGSSHGWLIMVEDSPSI 107

Query: 61  HIFNPFSRTQLSLPSQST 8
            + NP +R ++ LP+ ST
Sbjct: 108 FLLNPLTRERIELPALST 125


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