BLASTX nr result

ID: Coptis25_contig00039713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039713
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524280.1| Small glutamine-rich tetratricopeptide repea...   136   2e-30
emb|CAN62839.1| hypothetical protein VITISV_003392 [Vitis vinifera]   126   2e-27
ref|XP_002283097.2| PREDICTED: TPR repeat-containing thioredoxin...   124   6e-27
emb|CBI20201.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002317465.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26

>ref|XP_002524280.1| Small glutamine-rich tetratricopeptide repeat-containing protein A,
           putative [Ricinus communis] gi|223536471|gb|EEF38119.1|
           Small glutamine-rich tetratricopeptide repeat-containing
           protein A, putative [Ricinus communis]
          Length = 640

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/111 (63%), Positives = 81/111 (72%)
 Frame = -1

Query: 336 PQLFTCRAEALLKLHSLVDAGAGLSNIPKFEPYPPSCSQIKFFGMLSEAYVFYARAQVDV 157
           PQLF CRAEALLKLH L DA + LSNIPK EPY  SCSQ KFFGMLSEAY F  RAQ+++
Sbjct: 312 PQLFICRAEALLKLHQLEDAESCLSNIPKLEPYTNSCSQSKFFGMLSEAYSFLVRAQIEM 371

Query: 156 ALGRFEDAVSAAEKAGRIDPLNIEVAMXXXXXXXXXXXXXRGNDLFKTGNF 4
           ALGRFE+A++AAEKA  IDP N+EVA+             RGNDLFK+  F
Sbjct: 372 ALGRFENALTAAEKAAHIDPRNVEVAVLLNNVRLVTRARARGNDLFKSERF 422


>emb|CAN62839.1| hypothetical protein VITISV_003392 [Vitis vinifera]
          Length = 815

 Score =  126 bits (316), Expect = 2e-27
 Identities = 67/111 (60%), Positives = 80/111 (72%)
 Frame = -1

Query: 336 PQLFTCRAEALLKLHSLVDAGAGLSNIPKFEPYPPSCSQIKFFGMLSEAYVFYARAQVDV 157
           PQL +CRAEALLKLH + DA + LS+IPKFE Y PSCS  KFFGM++EAYV Y RAQV++
Sbjct: 393 PQLISCRAEALLKLHQIEDADSCLSSIPKFEHYSPSCST-KFFGMIAEAYVLYVRAQVEM 451

Query: 156 ALGRFEDAVSAAEKAGRIDPLNIEVAMXXXXXXXXXXXXXRGNDLFKTGNF 4
           ALGRFE+AV+AAEKAG ID  N+EV               RGN+LF +G F
Sbjct: 452 ALGRFENAVAAAEKAGLIDYSNVEVXKLLNNVKLVARARARGNELFSSGRF 502


>ref|XP_002283097.2| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Vitis
           vinifera]
          Length = 656

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/111 (58%), Positives = 79/111 (71%)
 Frame = -1

Query: 336 PQLFTCRAEALLKLHSLVDAGAGLSNIPKFEPYPPSCSQIKFFGMLSEAYVFYARAQVDV 157
           PQ+FTCR EA LKLH L DA + LS IPK EP   S SQ KFFGMLSEAY+ + +AQ+++
Sbjct: 328 PQIFTCRVEAHLKLHQLDDAESNLSYIPKSEPSGQSSSQAKFFGMLSEAYLHFVQAQIEM 387

Query: 156 ALGRFEDAVSAAEKAGRIDPLNIEVAMXXXXXXXXXXXXXRGNDLFKTGNF 4
           ALGRFE+AV+A EKAG+IDP N+EVA+             RGNDLFK+  F
Sbjct: 388 ALGRFENAVTAVEKAGQIDPRNVEVAVLLNNVRMVARARARGNDLFKSERF 438


>emb|CBI20201.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/111 (58%), Positives = 79/111 (71%)
 Frame = -1

Query: 336 PQLFTCRAEALLKLHSLVDAGAGLSNIPKFEPYPPSCSQIKFFGMLSEAYVFYARAQVDV 157
           PQ+FTCR EA LKLH L DA + LS IPK EP   S SQ KFFGMLSEAY+ + +AQ+++
Sbjct: 317 PQIFTCRVEAHLKLHQLDDAESNLSYIPKSEPSGQSSSQAKFFGMLSEAYLHFVQAQIEM 376

Query: 156 ALGRFEDAVSAAEKAGRIDPLNIEVAMXXXXXXXXXXXXXRGNDLFKTGNF 4
           ALGRFE+AV+A EKAG+IDP N+EVA+             RGNDLFK+  F
Sbjct: 377 ALGRFENAVTAVEKAGQIDPRNVEVAVLLNNVRMVARARARGNDLFKSERF 427


>ref|XP_002317465.1| predicted protein [Populus trichocarpa] gi|222860530|gb|EEE98077.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/111 (58%), Positives = 80/111 (72%)
 Frame = -1

Query: 336 PQLFTCRAEALLKLHSLVDAGAGLSNIPKFEPYPPSCSQIKFFGMLSEAYVFYARAQVDV 157
           PQLF CRAEALLKLH L DA + L  +PK EP+  +CSQ +FFGMLSEAY F  +AQ+++
Sbjct: 365 PQLFMCRAEALLKLHQLEDAESCLLKVPKLEPHA-TCSQARFFGMLSEAYPFLVQAQIEM 423

Query: 156 ALGRFEDAVSAAEKAGRIDPLNIEVAMXXXXXXXXXXXXXRGNDLFKTGNF 4
           ALGRFE+AV+AAEKAG+ID  N+EVA+             RGNDLFK+  F
Sbjct: 424 ALGRFENAVAAAEKAGQIDSRNVEVAVLLKNVRLVARARTRGNDLFKSERF 474


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