BLASTX nr result
ID: Coptis25_contig00039679
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00039679 (519 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK34055.1| unknown [Lotus japonicus] 55 5e-06 >gb|AFK34055.1| unknown [Lotus japonicus] Length = 217 Score = 55.5 bits (132), Expect = 5e-06 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 6/142 (4%) Frame = -2 Query: 518 PRLGWVKLNIVTSFKSNNYYPIGIGYVIRDSNGCFIAAG----THRGRGRTAEEAECRGA 351 P++GW+KLN+ S +S + G G V+RDS+G +I+ H G G + E Sbjct: 61 PKMGWIKLNVDGSLQSES---AGCGGVLRDSSGKWISGFAKKLAHPGGGHCPHKPEEEAL 117 Query: 350 LKGLQWC-RKFSSSVEVELDVKEVCNFLLNKPTSISWHSKPILEDVLEELATFE-NVNIQ 177 +GLQW + + VEVE D + L++ S S S ++ ++++ L + + Sbjct: 118 CRGLQWAWERGENRVEVESDRQG----LVDSVKSGSTTSDLVIREIMDLLYNRDWEATLN 173 Query: 176 WINRSANCVAQKLASAGHVLLS 111 WI AN VA +LA L S Sbjct: 174 WIPGDANRVADELADIARGLPS 195