BLASTX nr result

ID: Coptis25_contig00039679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039679
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34055.1| unknown [Lotus japonicus]                               55   5e-06

>gb|AFK34055.1| unknown [Lotus japonicus]
          Length = 217

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
 Frame = -2

Query: 518 PRLGWVKLNIVTSFKSNNYYPIGIGYVIRDSNGCFIAAG----THRGRGRTAEEAECRGA 351
           P++GW+KLN+  S +S +    G G V+RDS+G +I+       H G G    + E    
Sbjct: 61  PKMGWIKLNVDGSLQSES---AGCGGVLRDSSGKWISGFAKKLAHPGGGHCPHKPEEEAL 117

Query: 350 LKGLQWC-RKFSSSVEVELDVKEVCNFLLNKPTSISWHSKPILEDVLEELATFE-NVNIQ 177
            +GLQW   +  + VEVE D +     L++   S S  S  ++ ++++ L   +    + 
Sbjct: 118 CRGLQWAWERGENRVEVESDRQG----LVDSVKSGSTTSDLVIREIMDLLYNRDWEATLN 173

Query: 176 WINRSANCVAQKLASAGHVLLS 111
           WI   AN VA +LA     L S
Sbjct: 174 WIPGDANRVADELADIARGLPS 195


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