BLASTX nr result

ID: Coptis25_contig00039676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039676
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511418.1| DNA binding protein, putative [Ricinus commu...   108   6e-22
ref|XP_002322161.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_002318646.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|NP_001239892.1| uncharacterized protein LOC100787505 [Glycin...    80   1e-13
ref|XP_003525498.1| PREDICTED: uncharacterized protein LOC100811...    80   2e-13

>ref|XP_002511418.1| DNA binding protein, putative [Ricinus communis]
           gi|223550533|gb|EEF52020.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 173

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/90 (60%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
 Frame = +1

Query: 85  MKKNENSDSSKVDRKTVEKNRRVYMKGLSIKLASLIPKHH-NFSKDTLSQQDRLDHAEVY 261
           MKK  ++ S K+DRKTVE+NRR++MKGL  KLASLIP HH   SKDTLSQQD+LDHA  Y
Sbjct: 1   MKKTNSTGSPKLDRKTVERNRRIHMKGLCFKLASLIPSHHLKHSKDTLSQQDQLDHAAAY 60

Query: 262 IKELRERVEMLKRKKQRMMRSTRNEYGTNS 351
           IK L+ER+E LK+ K++ MRS       N+
Sbjct: 61  IKHLKERIEKLKKMKEQAMRSLATNSTNNN 90


>ref|XP_002322161.1| predicted protein [Populus trichocarpa] gi|222869157|gb|EEF06288.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/76 (64%), Positives = 61/76 (80%), Gaps = 2/76 (2%)
 Frame = +1

Query: 91  KNENSDSSKVDRKTVEKNRRVYMKGLSIKLASLIPKHHNF--SKDTLSQQDRLDHAEVYI 264
           +  NS++SK+DRKTVEKNRRV+MK L  KLASL+P HH F  SKD LSQQD+L+ A  YI
Sbjct: 2   EKSNSETSKLDRKTVEKNRRVHMKDLCFKLASLVP-HHFFKPSKDMLSQQDQLELAACYI 60

Query: 265 KELRERVEMLKRKKQR 312
           K++RERVE LKR K++
Sbjct: 61  KQMRERVEKLKRVKEQ 76


>ref|XP_002318646.1| predicted protein [Populus trichocarpa] gi|222859319|gb|EEE96866.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = +1

Query: 91  KNENSDSSKVDRKTVEKNRRVYMKGLSIKLASLIPKH-HNFSKDTLSQQDRLDHAEVYIK 267
           K   S+SS++DRKTVE+NRR++MK L +KLASL+P H    SKD LSQQD+L+ A  YIK
Sbjct: 2   KKRTSESSRLDRKTVERNRRIHMKDLCLKLASLLPPHLFKPSKDMLSQQDQLELAACYIK 61

Query: 268 ELRERVEMLKRKKQRMMRST 327
           +LRERVE LKR K+    +T
Sbjct: 62  QLRERVEGLKRVKEEQAITT 81


>ref|NP_001239892.1| uncharacterized protein LOC100787505 [Glycine max]
           gi|255639839|gb|ACU20212.1| unknown [Glycine max]
          Length = 161

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/80 (53%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
 Frame = +1

Query: 91  KNENSDSS---KVDRKTVEKNRRVYMKGLSIKLASLIPKHH-NFSKDTLSQQDRLDHAEV 258
           KN N+++S   K+DRKT+E+NRR++MK L  KL S IP ++   SKD LSQQD+L  A  
Sbjct: 2   KNTNTNTSGSPKLDRKTIERNRRIHMKSLCFKLVSTIPSNYLKTSKDMLSQQDQLHLAAT 61

Query: 259 YIKELRERVEMLKRKKQRMM 318
           YIK LRER+E LK +K++ M
Sbjct: 62  YIKHLRERIEKLKGEKEKAM 81


>ref|XP_003525498.1| PREDICTED: uncharacterized protein LOC100811485 [Glycine max]
          Length = 191

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = +1

Query: 82  KMKKNENSDSSKVDRKTVEKNRRVYMKGLSIKLASLIPKHH-NFSKDTLSQQDRLDHAEV 258
           K      S S K+DRKT+E+NRR++MK L  KL S IP +    +KD LSQQD+LD A  
Sbjct: 2   KKPNTSTSGSPKLDRKTIERNRRIHMKSLCFKLVSTIPSNDLKPTKDMLSQQDQLDLATT 61

Query: 259 YIKELRERVEMLKRKKQRMMRSTRNEYGTNS 351
           YIK L+ER+E LK +K+++M    +    N+
Sbjct: 62  YIKRLKERIEKLKGEKEKIMNMMMSSNQNNN 92


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