BLASTX nr result

ID: Coptis25_contig00039658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039658
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323203.1| NAC domain protein, IPR003441 [Populus trich...    54   1e-05

>ref|XP_002323203.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222867833|gb|EEF04964.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 340

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 40/92 (43%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
 Frame = +2

Query: 38  PIIPVGFYFVPTEVEMI-YYLRNSYAYGGGLDGIMKNIIVTKDLYGSEEPAEIFNGSSAT 214
           P  P GF FVPTE E+I YYL N     G   G    +I   DLYG EEP EIFN     
Sbjct: 6   PRPPPGFKFVPTEEELINYYLYNKIH--GRFHGEDATLIKDYDLYGEEEPWEIFNKFQGH 63

Query: 215 E-----MYFLTVIKKK--YGGTNVDRTVSDKG 289
           +     +YFLT + KK   G  N++R+V   G
Sbjct: 64  KFGDNGLYFLTTLHKKTTNGIKNMNRSVGTHG 95


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