BLASTX nr result

ID: Coptis25_contig00039620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039620
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601493.1| hypothetical protein MTR_3g082270 [Medicago ...    69   3e-10
ref|XP_003542179.1| PREDICTED: uncharacterized protein LOC100796...    68   7e-10
ref|XP_003556875.1| PREDICTED: uncharacterized protein LOC100777...    67   1e-09
ref|XP_002321322.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_004140813.1| PREDICTED: uncharacterized protein LOC101205...    62   5e-08

>ref|XP_003601493.1| hypothetical protein MTR_3g082270 [Medicago truncatula]
           gi|355490541|gb|AES71744.1| hypothetical protein
           MTR_3g082270 [Medicago truncatula]
          Length = 475

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/48 (66%), Positives = 40/48 (83%)
 Frame = +2

Query: 71  TIIFSSRICNNVELEVGSSVRIYPPWKEVQVTSTGAGVILCTYFSQIS 214
           TIIF  R+CNNV+LEVGS +RI+PPWKEVQV +    +ILC+YFS+IS
Sbjct: 427 TIIFCPRVCNNVDLEVGSLIRIHPPWKEVQVGND--NIILCSYFSEIS 472


>ref|XP_003542179.1| PREDICTED: uncharacterized protein LOC100796411 [Glycine max]
          Length = 179

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
 Frame = +2

Query: 53  GRECSK-TIIFSSRICNNVELEVGSSVRIYPPW------KEVQVTSTGAGVILCTYFSQI 211
           G ECS+ TIIFS R+CNNV+LEVGS +RI+PPW      KEVQ  +    VILCTYFS+I
Sbjct: 118 GSECSQSTIIFSPRVCNNVDLEVGSLIRIHPPWFWFLDRKEVQAGND--NVILCTYFSEI 175


>ref|XP_003556875.1| PREDICTED: uncharacterized protein LOC100777093 [Glycine max]
          Length = 63

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/54 (59%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
 Frame = +2

Query: 53  GRECSK-TIIFSSRICNNVELEVGSSVRIYPPWKEVQVTSTGAGVILCTYFSQI 211
           GR+ S+ TIIFS R+CNNV+LEVG+ ++I+PPWKE QV +    +I+CTYFS+I
Sbjct: 5   GRKSSQSTIIFSPRVCNNVDLEVGNLIQIHPPWKEAQVGND--NIIVCTYFSEI 56


>ref|XP_002321322.1| predicted protein [Populus trichocarpa] gi|222862095|gb|EEE99637.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/70 (48%), Positives = 47/70 (67%)
 Frame = +2

Query: 5   IPDIKLPMCRETPKKLGRECSKTIIFSSRICNNVELEVGSSVRIYPPWKEVQVTSTGAGV 184
           I D + P   +T    GR   +T+IFS R+C+NV+L++G+ + IYPPWKEVQV  +   V
Sbjct: 138 IKDSQSPESSKTFVDRGR--IRTVIFSPRVCSNVDLDLGNLICIYPPWKEVQVIGSDEFV 195

Query: 185 ILCTYFSQIS 214
           IL TYFS +S
Sbjct: 196 ILTTYFSHVS 205


>ref|XP_004140813.1| PREDICTED: uncharacterized protein LOC101205023 [Cucumis sativus]
          Length = 377

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = +2

Query: 68  KTIIFSSRICNNVELEVGSSVRIYPPWKEVQVTSTGAGVILCTYFSQIS 214
           +T+IFS R+C+NVELEVG+ +RI PPWKEV V    + +IL TYF+Q++
Sbjct: 330 RTVIFSPRVCSNVELEVGNLIRINPPWKEVPVDDAHS-IILSTYFTQLT 377


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