BLASTX nr result
ID: Coptis25_contig00039580
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00039580 (375 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269174.2| PREDICTED: uncharacterized protein LOC100263... 49 6e-07 emb|CAN66891.1| hypothetical protein VITISV_042965 [Vitis vinifera] 50 4e-06 emb|CAN79821.1| hypothetical protein VITISV_020029 [Vitis vinifera] 49 6e-06 >ref|XP_002269174.2| PREDICTED: uncharacterized protein LOC100263584 [Vitis vinifera] gi|296081310|emb|CBI17754.3| unnamed protein product [Vitis vinifera] Length = 367 Score = 48.5 bits (114), Expect(2) = 6e-07 Identities = 23/57 (40%), Positives = 35/57 (61%) Frame = -3 Query: 361 GVLWRRFKTHLTKEFVTPYLDDP*LLENPPYLWYVYPDMKTPDWLKFVMIRCSEEFQ 191 G+ WR FK++LT+ ++ P+ D P LL++PP Y + DW FV R +E+FQ Sbjct: 105 GMKWRTFKSYLTRTYIIPFKDQPELLKHPP---PKYSFIDQEDWDLFVQSRLTEQFQ 158 Score = 29.6 bits (65), Expect(2) = 6e-07 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -2 Query: 86 SKLQAERRDVNEYDHRIGKDGYIGLANK 3 S Q ERR ++ HR+ + GY+GLA++ Sbjct: 161 SNSQIERRSKHKLVHRLSRKGYVGLADE 188 >emb|CAN66891.1| hypothetical protein VITISV_042965 [Vitis vinifera] Length = 1736 Score = 50.1 bits (118), Expect(2) = 4e-06 Identities = 28/65 (43%), Positives = 35/65 (53%) Frame = -3 Query: 373 ISHCGVLWRRFKTHLTKEFVTPYLDDP*LLENPPYLWYVYPDMKTPDWLKFVMIRCSEEF 194 IS G +R F+ LTKE++ PY D P L PP + P DW K V R S+EF Sbjct: 1173 ISSIGTSFRSFRHRLTKEYILPYKDKPEYLLQPPTEYNYIP---IEDWRKLVANRLSKEF 1229 Query: 193 QVNTK 179 QV +K Sbjct: 1230 QVKSK 1234 Score = 25.4 bits (54), Expect(2) = 4e-06 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -2 Query: 86 SKLQAERRDVNEYDHRIGKDGYIGL 12 SK ERR Y HR+ + GY GL Sbjct: 1233 SKKGKERRAKYVYIHRVSRKGYAGL 1257 >emb|CAN79821.1| hypothetical protein VITISV_020029 [Vitis vinifera] Length = 512 Score = 48.9 bits (115), Expect(2) = 6e-06 Identities = 28/65 (43%), Positives = 34/65 (52%) Frame = -3 Query: 373 ISHCGVLWRRFKTHLTKEFVTPYLDDP*LLENPPYLWYVYPDMKTPDWLKFVMIRCSEEF 194 IS G +R F+ LTKE++ PY D P L PP + P DW K V R S EF Sbjct: 39 ISSIGTSFRSFRHTLTKEYILPYKDKPEYLLQPPIEYNYIP---IEDWRKLVANRLSTEF 95 Query: 193 QVNTK 179 QV +K Sbjct: 96 QVKSK 100 Score = 25.8 bits (55), Expect(2) = 6e-06 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -2 Query: 86 SKLQAERRDVNEYDHRIGKDGYIGL 12 SK ERR Y HR+ + GY GL Sbjct: 99 SKKGKERRAKYXYIHRVSRKGYAGL 123