BLASTX nr result

ID: Coptis25_contig00039580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039580
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269174.2| PREDICTED: uncharacterized protein LOC100263...    49   6e-07
emb|CAN66891.1| hypothetical protein VITISV_042965 [Vitis vinifera]    50   4e-06
emb|CAN79821.1| hypothetical protein VITISV_020029 [Vitis vinifera]    49   6e-06

>ref|XP_002269174.2| PREDICTED: uncharacterized protein LOC100263584 [Vitis vinifera]
           gi|296081310|emb|CBI17754.3| unnamed protein product
           [Vitis vinifera]
          Length = 367

 Score = 48.5 bits (114), Expect(2) = 6e-07
 Identities = 23/57 (40%), Positives = 35/57 (61%)
 Frame = -3

Query: 361 GVLWRRFKTHLTKEFVTPYLDDP*LLENPPYLWYVYPDMKTPDWLKFVMIRCSEEFQ 191
           G+ WR FK++LT+ ++ P+ D P LL++PP     Y  +   DW  FV  R +E+FQ
Sbjct: 105 GMKWRTFKSYLTRTYIIPFKDQPELLKHPP---PKYSFIDQEDWDLFVQSRLTEQFQ 158



 Score = 29.6 bits (65), Expect(2) = 6e-07
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 86  SKLQAERRDVNEYDHRIGKDGYIGLANK 3
           S  Q ERR  ++  HR+ + GY+GLA++
Sbjct: 161 SNSQIERRSKHKLVHRLSRKGYVGLADE 188


>emb|CAN66891.1| hypothetical protein VITISV_042965 [Vitis vinifera]
          Length = 1736

 Score = 50.1 bits (118), Expect(2) = 4e-06
 Identities = 28/65 (43%), Positives = 35/65 (53%)
 Frame = -3

Query: 373  ISHCGVLWRRFKTHLTKEFVTPYLDDP*LLENPPYLWYVYPDMKTPDWLKFVMIRCSEEF 194
            IS  G  +R F+  LTKE++ PY D P  L  PP  +   P     DW K V  R S+EF
Sbjct: 1173 ISSIGTSFRSFRHRLTKEYILPYKDKPEYLLQPPTEYNYIP---IEDWRKLVANRLSKEF 1229

Query: 193  QVNTK 179
            QV +K
Sbjct: 1230 QVKSK 1234



 Score = 25.4 bits (54), Expect(2) = 4e-06
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 86   SKLQAERRDVNEYDHRIGKDGYIGL 12
            SK   ERR    Y HR+ + GY GL
Sbjct: 1233 SKKGKERRAKYVYIHRVSRKGYAGL 1257


>emb|CAN79821.1| hypothetical protein VITISV_020029 [Vitis vinifera]
          Length = 512

 Score = 48.9 bits (115), Expect(2) = 6e-06
 Identities = 28/65 (43%), Positives = 34/65 (52%)
 Frame = -3

Query: 373 ISHCGVLWRRFKTHLTKEFVTPYLDDP*LLENPPYLWYVYPDMKTPDWLKFVMIRCSEEF 194
           IS  G  +R F+  LTKE++ PY D P  L  PP  +   P     DW K V  R S EF
Sbjct: 39  ISSIGTSFRSFRHTLTKEYILPYKDKPEYLLQPPIEYNYIP---IEDWRKLVANRLSTEF 95

Query: 193 QVNTK 179
           QV +K
Sbjct: 96  QVKSK 100



 Score = 25.8 bits (55), Expect(2) = 6e-06
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 86  SKLQAERRDVNEYDHRIGKDGYIGL 12
           SK   ERR    Y HR+ + GY GL
Sbjct: 99  SKKGKERRAKYXYIHRVSRKGYAGL 123


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