BLASTX nr result

ID: Coptis25_contig00039576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039576
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73692.1| hypothetical protein VITISV_042264 [Vitis vinifera]    50   8e-07
emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]    52   1e-06
emb|CAN76478.1| hypothetical protein VITISV_028118 [Vitis vinifera]    48   2e-06
emb|CAN71085.1| hypothetical protein VITISV_036778 [Vitis vinifera]    48   4e-06
emb|CAN71503.1| hypothetical protein VITISV_021014 [Vitis vinifera]    49   5e-06

>emb|CAN73692.1| hypothetical protein VITISV_042264 [Vitis vinifera]
          Length = 539

 Score = 49.7 bits (117), Expect(2) = 8e-07
 Identities = 25/70 (35%), Positives = 42/70 (60%)
 Frame = +3

Query: 87  VKISTRFSVIDVKSSYTSILGRRWIHKIQAVPSTLDQVLHFPGPQGIIELRSN*LEAHRY 266
           V ++ +FSV+   S +  ILGR W+H ++A+PST  Q++ F   +G I L  + L A + 
Sbjct: 455 VTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTNEGQINLYGSQLAARQC 514

Query: 267 NQVSTTTTTT 296
            Q++  T T+
Sbjct: 515 YQIARETGTS 524



 Score = 28.1 bits (61), Expect(2) = 8e-07
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 7   LYGFNEDRTDAFGDAILPVSIG 72
           L GFN   T + GD ILPV +G
Sbjct: 432 LSGFNGSSTTSLGDIILPVQVG 453


>emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]
          Length = 508

 Score = 51.6 bits (122), Expect(2) = 1e-06
 Identities = 26/70 (37%), Positives = 43/70 (61%)
 Frame = +3

Query: 87  VKISTRFSVIDVKSSYTSILGRRWIHKIQAVPSTLDQVLHFPGPQGIIELRSN*LEAHRY 266
           V ++ +FSV+   SS+  ILGR W+H ++A+PST  Q++ F    G I+L  + L A + 
Sbjct: 424 VTLNVQFSVVQDLSSFNVILGRTWLHYMKAIPSTYHQMVSFLTKDGQIDLYGSQLAARQC 483

Query: 267 NQVSTTTTTT 296
            Q++  T T+
Sbjct: 484 YQITRETGTS 493



 Score = 25.8 bits (55), Expect(2) = 1e-06
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 7   LYGFNEDRTDAFGDAILPVSIG 72
           L GFN   T + GD +LPV  G
Sbjct: 401 LPGFNGSSTTSLGDIVLPVQAG 422


>emb|CAN76478.1| hypothetical protein VITISV_028118 [Vitis vinifera]
          Length = 517

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 23/65 (35%), Positives = 40/65 (61%)
 Frame = +3

Query: 84  MVKISTRFSVIDVKSSYTSILGRRWIHKIQAVPSTLDQVLHFPGPQGIIELRSN*LEAHR 263
           +V ++ +FSV+   S +  ILGR W+H ++A+PST  Q++ F    G I+L  + L A +
Sbjct: 432 LVTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQMVSFLTNNGQIDLYGSQLAARQ 491

Query: 264 YNQVS 278
             Q++
Sbjct: 492 CYQIA 496



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 7   LYGFNEDRTDAFGDAILPVSIG 72
           L GFNE  T + GD +LPV  G
Sbjct: 410 LSGFNESSTTSLGDIVLPVQAG 431


>emb|CAN71085.1| hypothetical protein VITISV_036778 [Vitis vinifera]
          Length = 549

 Score = 47.8 bits (112), Expect(2) = 4e-06
 Identities = 23/64 (35%), Positives = 39/64 (60%)
 Frame = +3

Query: 87  VKISTRFSVIDVKSSYTSILGRRWIHKIQAVPSTLDQVLHFPGPQGIIELRSN*LEAHRY 266
           V ++ +FSV+   S +  ILGR W+H ++A+PST  Q++ F    G I+L  + L A + 
Sbjct: 465 VTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTYHQIVSFLTNDGQIDLYGSQLAARQC 524

Query: 267 NQVS 278
            Q++
Sbjct: 525 YQIA 528



 Score = 27.7 bits (60), Expect(2) = 4e-06
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 7   LYGFNEDRTDAFGDAILPVSIG 72
           L GFN   T + GD +LPV +G
Sbjct: 442 LSGFNGSSTTSLGDIVLPVQVG 463


>emb|CAN71503.1| hypothetical protein VITISV_021014 [Vitis vinifera]
          Length = 510

 Score = 48.5 bits (114), Expect(2) = 5e-06
 Identities = 24/64 (37%), Positives = 40/64 (62%)
 Frame = +3

Query: 87  VKISTRFSVIDVKSSYTSILGRRWIHKIQAVPSTLDQVLHFPGPQGIIELRSN*LEAHRY 266
           V ++ +FSV+   S +  ILGR W+H ++A+PST  Q++ F   +G I+L  N L A + 
Sbjct: 426 VTLNVQFSVVQELSPFNIILGRTWLHYMKAIPSTYHQMVSFLTNEGQIDLYGNQLAACQC 485

Query: 267 NQVS 278
            Q++
Sbjct: 486 YQIA 489



 Score = 26.6 bits (57), Expect(2) = 5e-06
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 7   LYGFNEDRTDAFGDAILPVSIG 72
           L GFN   T + GD ILPV  G
Sbjct: 403 LSGFNGSSTTSLGDIILPVQAG 424


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