BLASTX nr result

ID: Coptis25_contig00039558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039558
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY84145.1| late embryogenesis abundant protein [Catharanthus...    80   2e-13
ref|NP_188188.1| late embryogenesis abundant domain-containing p...    69   4e-10
emb|CAA63006.1| LEA76 homologue type2 [Arabidopsis thaliana]           69   4e-10
gb|ADQ91835.1| late embryogenesis abundant protein group 3 prote...    68   7e-10
emb|CAN61339.1| hypothetical protein VITISV_025029 [Vitis vinifera]    67   1e-09

>gb|AAY84145.1| late embryogenesis abundant protein [Catharanthus roseus]
          Length = 163

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/119 (42%), Positives = 61/119 (51%), Gaps = 22/119 (18%)
 Frame = +3

Query: 63  MASKDQSNKAGEAKGQAQEKTGQIMEGLR----------------------XXXXXXXXX 176
           MAS +QS KAGEAKGQAQEKTGQ+M  ++                               
Sbjct: 1   MASHEQSYKAGEAKGQAQEKTGQMMGDVKEKTQQAKDKASETAQSAQGRAQEKKDQTGSY 60

Query: 177 XXXXXXXXKDKVSGTTQATKDKTSDGTRAAGDRAHESAQSARETAEAGKEKTGGIVQGT 353
                   KDK+S TTQ+ K++ S    A   +A E AQS +ETAEAGKEKTGG +Q T
Sbjct: 61  VSDKAGAAKDKLSETTQSAKERASGAAEATKQKASEMAQSGKETAEAGKEKTGGFLQKT 119


>ref|NP_188188.1| late embryogenesis abundant domain-containing protein [Arabidopsis
           thaliana] gi|11994339|dbj|BAB02298.1| embryonic abundant
           protein LEA-like [Arabidopsis thaliana]
           gi|14532804|gb|AAK64183.1| putative LEA76 homologue
           type2 [Arabidopsis thaliana] gi|15809790|gb|AAL06823.1|
           AT3g15670/MSJ11_7 [Arabidopsis thaliana]
           gi|19310821|gb|AAL85141.1| putative LEA76 homologue
           type2 [Arabidopsis thaliana] gi|332642191|gb|AEE75712.1|
           late embryogenesis abundant domain-containing protein
           [Arabidopsis thaliana]
          Length = 225

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/105 (40%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
 Frame = +3

Query: 63  MASKDQSNKAGEAKGQAQEKTGQIMEGLRXXXXXXXXXXXXXXXXXKDKVSGTTQATKDK 242
           MAS  QS KAGE +G+AQEKTGQ M  +R                 + K   T Q+ KDK
Sbjct: 1   MASNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDK 60

Query: 243 TSDGTRAAGDRAHESAQSAR---------------ETAEAGKEKT 332
           TS   +AA  +AHE+AQSA+               ET +A KEKT
Sbjct: 61  TSQTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEKT 105


>emb|CAA63006.1| LEA76 homologue type2 [Arabidopsis thaliana]
          Length = 225

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
 Frame = +3

Query: 63  MASKDQSNKAGEAKGQAQEKTGQIMEGLRXXXXXXXXXXXXXXXXXKDKVSGTTQATKDK 242
           MAS  QS KAGE +G+AQEKTGQ M  +R                 + K   T Q+ KDK
Sbjct: 1   MASNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDK 60

Query: 243 TSDGTRAAGDRAHESAQSARE----TAEAGKEKTGGIVQ 347
           TS   +AA  +AHE+AQSA+E    TA+  ++K    +Q
Sbjct: 61  TSQTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHKTMQ 99


>gb|ADQ91835.1| late embryogenesis abundant protein group 3 protein [Arachis
           hypogaea]
          Length = 154

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/119 (36%), Positives = 56/119 (47%), Gaps = 22/119 (18%)
 Frame = +3

Query: 63  MASKDQSNKAGEAKGQAQEKTGQIMEGLRXXXXXXXXXXXXXXXXXKDKVSGTTQATKDK 242
           MAS DQS +AGEAKGQ QEKT Q+M  +                   DK + T QA KDK
Sbjct: 1   MASHDQSFRAGEAKGQTQEKTNQMMSNVGDKAQAVKDKTAQEAHSAWDKTAQTAQAAKDK 60

Query: 243 TSDGTRAAGDRAHESAQSAR----------------------ETAEAGKEKTGGIVQGT 353
           T    + A DR+ E+AQ+ R                      E+A++GK+  GG +Q T
Sbjct: 61  TQQAAQTARDRSSETAQNTRAKAQNTAGATRDKASEMGQATRESAQSGKDNAGGFLQQT 119


>emb|CAN61339.1| hypothetical protein VITISV_025029 [Vitis vinifera]
          Length = 380

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 46/130 (35%), Positives = 60/130 (46%), Gaps = 29/130 (22%)
 Frame = +3

Query: 51  KKVEMASKDQSNKAGEAKGQAQEKTGQIM-------EGLRXXXXXXXXXXXXXXXXXKDK 209
           + ++MAS DQS KAGE K  AQEKT Q M       E ++                 KDK
Sbjct: 221 QNIKMASPDQSYKAGETKAHAQEKTDQAMAKGREASEVVKEKAQGAKDKTAETAQHAKDK 280

Query: 210 VSGTTQATKDKTSDG----------------------TRAAGDRAHESAQSARETAEAGK 323
            + T Q TK +T +                       T A  ++A E  +S RETAEAGK
Sbjct: 281 TADTAQQTKGRTQESKDQSGGYLSEKAGAAKEKALGATEATKEKASEMVESGRETAEAGK 340

Query: 324 EKTGGIVQGT 353
           +K+GGI+Q T
Sbjct: 341 DKSGGILQTT 350


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