BLASTX nr result

ID: Coptis25_contig00039556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039556
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512705.1| conserved hypothetical protein [Ricinus comm...   102   3e-20
ref|XP_002297897.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002337327.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
emb|CBI29296.3| unnamed protein product [Vitis vinifera]               92   6e-17
emb|CAN82114.1| hypothetical protein VITISV_031339 [Vitis vinifera]    92   6e-17

>ref|XP_002512705.1| conserved hypothetical protein [Ricinus communis]
           gi|223548666|gb|EEF50157.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 470

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/94 (54%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
 Frame = -3

Query: 284 DKNIFLQLMILDGCFMLEVLRSVSGIT-SDYAYNDPIFSHHGKIHIMPHIRRDXXXXXXX 108
           D + FLQLMILDGCF+LE+LR  +  +  DYA NDP+FS+HGK++IMP+I RD       
Sbjct: 113 DTSRFLQLMILDGCFLLEILRIATDQSLDDYAPNDPVFSNHGKLYIMPYIMRDMLMLQNQ 172

Query: 107 XXXXXLEILHSIETGKEKNEEFLNKMILKFCSPN 6
                L+ L ++E+GKEK+EEF+NK+ILKFC P+
Sbjct: 173 LPMLVLDKLVAVESGKEKDEEFVNKLILKFCFPD 206


>ref|XP_002297897.1| predicted protein [Populus trichocarpa] gi|222845155|gb|EEE82702.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/93 (49%), Positives = 61/93 (65%)
 Frame = -3

Query: 284 DKNIFLQLMILDGCFMLEVLRSVSGITSDYAYNDPIFSHHGKIHIMPHIRRDXXXXXXXX 105
           DKN FLQLMILDGCFMLE++R  S     YA NDPIFS HG+++I P+IRRD        
Sbjct: 115 DKNKFLQLMILDGCFMLEIIRLASHSLDGYAANDPIFSSHGRLYIAPYIRRDMLLLENQL 174

Query: 104 XXXXLEILHSIETGKEKNEEFLNKMILKFCSPN 6
               L  L ++E+   ++E F+N+++L FC PN
Sbjct: 175 PMLVLYKLFALESNGAQDEGFVNQLVLNFCYPN 207


>ref|XP_002337327.1| predicted protein [Populus trichocarpa] gi|222838779|gb|EEE77130.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/93 (49%), Positives = 61/93 (65%)
 Frame = -3

Query: 284 DKNIFLQLMILDGCFMLEVLRSVSGITSDYAYNDPIFSHHGKIHIMPHIRRDXXXXXXXX 105
           D   FLQLMILDGCFMLE++R     ++DYA +DP+FS HG++++ P IRRD        
Sbjct: 114 DTGKFLQLMILDGCFMLEIMRLAIQPSNDYAADDPVFSIHGRVYVAPFIRRDMLIVENQL 173

Query: 104 XXXXLEILHSIETGKEKNEEFLNKMILKFCSPN 6
               L  L + E+  EKNEEF+NK++L FC PN
Sbjct: 174 PMLVLYKLVATESDGEKNEEFVNKLVLTFCHPN 206


>emb|CBI29296.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/89 (49%), Positives = 61/89 (68%)
 Frame = -3

Query: 284 DKNIFLQLMILDGCFMLEVLRSVSGITSDYAYNDPIFSHHGKIHIMPHIRRDXXXXXXXX 105
           D + FLQLMI+DGCFMLE+LR+ +    DY  NDPIFS HG+++IMP++RRD        
Sbjct: 111 DTSAFLQLMIVDGCFMLEILRTATHTMDDYDPNDPIFSDHGRLYIMPYVRRDMLMLENQL 170

Query: 104 XXXXLEILHSIETGKEKNEEFLNKMILKF 18
               L+ L ++E+ K K+ E +NK+ILKF
Sbjct: 171 PMLVLDKLLAVESDKAKDPELINKLILKF 199


>emb|CAN82114.1| hypothetical protein VITISV_031339 [Vitis vinifera]
          Length = 449

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/89 (49%), Positives = 61/89 (68%)
 Frame = -3

Query: 284 DKNIFLQLMILDGCFMLEVLRSVSGITSDYAYNDPIFSHHGKIHIMPHIRRDXXXXXXXX 105
           D + FLQLMI+DGCFMLE+LR+ +    DY  NDPIFS HG+++IMP++RRD        
Sbjct: 111 DTSAFLQLMIVDGCFMLEILRTATHTMDDYDPNDPIFSDHGRLYIMPYVRRDMLMLENQL 170

Query: 104 XXXXLEILHSIETGKEKNEEFLNKMILKF 18
               L+ L ++E+ K K+ E +NK+ILKF
Sbjct: 171 PMLVLDKLLAVESDKAKDPELINKLILKF 199


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