BLASTX nr result

ID: Coptis25_contig00039540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039540
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O23826.1|K125_TOBAC RecName: Full=125 kDa kinesin-related pro...   184   5e-45
ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus c...   183   1e-44
ref|XP_002276356.1| PREDICTED: 125 kDa kinesin-related protein-l...   182   2e-44
dbj|BAK06808.1| predicted protein [Hordeum vulgare subsp. vulgare]    181   4e-44
ref|XP_002309420.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-44

>sp|O23826.1|K125_TOBAC RecName: Full=125 kDa kinesin-related protein
           gi|2582971|dbj|BAA23159.1| TKRP125 [Nicotiana tabacum]
          Length = 1006

 Score =  184 bits (468), Expect = 5e-45
 Identities = 90/110 (81%), Positives = 95/110 (86%)
 Frame = +3

Query: 3   QVVTCNDYQREVAVSQNIAGKQIDRVFTFDKVFGPAAQQRDLYDQAVVPIVNEVLEGFNC 182
           QVVTCNDYQREVAVSQNIAGK IDR+FTFDKVFGP+AQQRDLYDQA+VPIVNEVLEGFNC
Sbjct: 30  QVVTCNDYQREVAVSQNIAGKHIDRIFTFDKVFGPSAQQRDLYDQAIVPIVNEVLEGFNC 89

Query: 183 TIFAYGQTGTGKTYTMXXXXXXXXXXXXXQLPPEAGVIPRAVKQIFDTLE 332
           TIFAYGQTGTGKTYTM             +LP EAGVIPRAVKQ+FDTLE
Sbjct: 90  TIFAYGQTGTGKTYTMEGECKRSKSGPNGELPQEAGVIPRAVKQVFDTLE 139


>ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
           gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130,
           putative [Ricinus communis]
          Length = 1530

 Score =  183 bits (464), Expect = 1e-44
 Identities = 90/110 (81%), Positives = 96/110 (87%)
 Frame = +3

Query: 3   QVVTCNDYQREVAVSQNIAGKQIDRVFTFDKVFGPAAQQRDLYDQAVVPIVNEVLEGFNC 182
           QVVTCNDYQREV+VSQ+IAGK IDRVFTFDKVFGP+AQQ+DLY+QAVVPIVNEVLEGFNC
Sbjct: 33  QVVTCNDYQREVSVSQSIAGKHIDRVFTFDKVFGPSAQQKDLYEQAVVPIVNEVLEGFNC 92

Query: 183 TIFAYGQTGTGKTYTMXXXXXXXXXXXXXQLPPEAGVIPRAVKQIFDTLE 332
           TIFAYGQTGTGKTYTM             +LPPEAGVIPRAVKQIFDTLE
Sbjct: 93  TIFAYGQTGTGKTYTMEGECKRAKSGPNGELPPEAGVIPRAVKQIFDTLE 142


>ref|XP_002276356.1| PREDICTED: 125 kDa kinesin-related protein-like [Vitis vinifera]
          Length = 1009

 Score =  182 bits (462), Expect = 2e-44
 Identities = 89/110 (80%), Positives = 96/110 (87%)
 Frame = +3

Query: 3   QVVTCNDYQREVAVSQNIAGKQIDRVFTFDKVFGPAAQQRDLYDQAVVPIVNEVLEGFNC 182
           QVVTCNDYQREVAVSQ+IAGK IDRVFTFDKVFGP+AQQ+DLY+QAV+PIVNEVLEGFNC
Sbjct: 33  QVVTCNDYQREVAVSQSIAGKHIDRVFTFDKVFGPSAQQKDLYEQAVIPIVNEVLEGFNC 92

Query: 183 TIFAYGQTGTGKTYTMXXXXXXXXXXXXXQLPPEAGVIPRAVKQIFDTLE 332
           TIFAYGQTGTGKTYTM             +LPPEAGVIPRAV+QIFDTLE
Sbjct: 93  TIFAYGQTGTGKTYTMEGECKRSKSGPNGELPPEAGVIPRAVQQIFDTLE 142


>dbj|BAK06808.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1033

 Score =  181 bits (460), Expect = 4e-44
 Identities = 89/110 (80%), Positives = 94/110 (85%)
 Frame = +3

Query: 3   QVVTCNDYQREVAVSQNIAGKQIDRVFTFDKVFGPAAQQRDLYDQAVVPIVNEVLEGFNC 182
           QVVTCNDYQREVAV+Q IAGKQIDRVFTFDKVFGP A+QRDLYDQA++PIVNEVLEGFNC
Sbjct: 59  QVVTCNDYQREVAVTQTIAGKQIDRVFTFDKVFGPTARQRDLYDQAIIPIVNEVLEGFNC 118

Query: 183 TIFAYGQTGTGKTYTMXXXXXXXXXXXXXQLPPEAGVIPRAVKQIFDTLE 332
           TIFAYGQTGTGKTYTM             QLP +AGVIPRAVKQIFDTLE
Sbjct: 119 TIFAYGQTGTGKTYTMEGECRRAKSGPEGQLPSDAGVIPRAVKQIFDTLE 168


>ref|XP_002309420.1| predicted protein [Populus trichocarpa] gi|222855396|gb|EEE92943.1|
           predicted protein [Populus trichocarpa]
          Length = 996

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/110 (81%), Positives = 95/110 (86%)
 Frame = +3

Query: 3   QVVTCNDYQREVAVSQNIAGKQIDRVFTFDKVFGPAAQQRDLYDQAVVPIVNEVLEGFNC 182
           QVVTCNDYQREVAVSQNIAGK IDRVFTFDKVFGP+AQQ+DLY+QAVVPIVNEVLEGFNC
Sbjct: 33  QVVTCNDYQREVAVSQNIAGKHIDRVFTFDKVFGPSAQQKDLYEQAVVPIVNEVLEGFNC 92

Query: 183 TIFAYGQTGTGKTYTMXXXXXXXXXXXXXQLPPEAGVIPRAVKQIFDTLE 332
           TIFAYGQTGTGKTYTM             +LP EAGVIPRAV+QIFDTLE
Sbjct: 93  TIFAYGQTGTGKTYTMEGECKRSKSGPNGELPSEAGVIPRAVQQIFDTLE 142


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