BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039510
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139446.1| PREDICTED: 50S ribosomal protein L19, chloro...    62   5e-15
ref|XP_004160907.1| PREDICTED: 50S ribosomal protein L19, chloro...    62   5e-15
ref|NP_196736.1| Ribosomal protein L19 family protein [Arabidops...    60   9e-15
emb|CBI14940.3| unnamed protein product [Vitis vinifera]               60   1e-14
ref|XP_002277262.1| PREDICTED: uncharacterized protein LOC100255...    60   1e-14

>ref|XP_004139446.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 269

 Score = 62.4 bits (150), Expect(2) = 5e-15
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = -2

Query: 232 HICRY*TRKQCRK*RNKERLQDIKPGYIIQLKVEVPENKRGVPTLKGIVIARR 74
           HI +   ++   + + +  + DIKPGYI+QLKVEVPENKR + TLKGIVIARR
Sbjct: 158 HIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARR 210



 Score = 43.1 bits (100), Expect(2) = 5e-15
 Identities = 18/24 (75%), Positives = 23/24 (95%)
 Frame = -3

Query: 72  NSGLNSTFRLSRLVAGVGVESVFP 1
           N+GLNSTFR+ R+VAGVG+ES+FP
Sbjct: 211 NAGLNSTFRIRRVVAGVGIESLFP 234


>ref|XP_004160907.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 189

 Score = 62.4 bits (150), Expect(2) = 5e-15
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = -2

Query: 232 HICRY*TRKQCRK*RNKERLQDIKPGYIIQLKVEVPENKRGVPTLKGIVIARR 74
           HI +   ++   + + +  + DIKPGYI+QLKVEVPENKR + TLKGIVIARR
Sbjct: 78  HIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARR 130



 Score = 43.1 bits (100), Expect(2) = 5e-15
 Identities = 18/24 (75%), Positives = 23/24 (95%)
 Frame = -3

Query: 72  NSGLNSTFRLSRLVAGVGVESVFP 1
           N+GLNSTFR+ R+VAGVG+ES+FP
Sbjct: 131 NAGLNSTFRIRRVVAGVGIESLFP 154


>ref|NP_196736.1| Ribosomal protein L19 family protein [Arabidopsis thaliana]
           gi|14030717|gb|AAK53033.1|AF375449_1
           AT5g11750/T22P22_140 [Arabidopsis thaliana]
           gi|7573389|emb|CAB87693.1| putative protein [Arabidopsis
           thaliana] gi|16974529|gb|AAL31174.1|
           AT5g11750/T22P22_140 [Arabidopsis thaliana]
           gi|332004334|gb|AED91717.1| Ribosomal protein L19 family
           protein [Arabidopsis thaliana]
          Length = 229

 Score = 60.1 bits (144), Expect(2) = 9e-15
 Identities = 29/53 (54%), Positives = 38/53 (71%)
 Frame = -2

Query: 232 HICRY*TRKQCRK*RNKERLQDIKPGYIIQLKVEVPENKRGVPTLKGIVIARR 74
           HI +   ++   + RN   + +IKPGYI+QLKVEVPENKR V  +KG+VIARR
Sbjct: 118 HIMQIVDKEAVEEVRNLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARR 170



 Score = 44.7 bits (104), Expect(2) = 9e-15
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = -3

Query: 72  NSGLNSTFRLSRLVAGVGVESVFP 1
           N+GLNSTFR+ RLVAGVGVES+FP
Sbjct: 171 NAGLNSTFRIRRLVAGVGVESMFP 194


>emb|CBI14940.3| unnamed protein product [Vitis vinifera]
          Length = 270

 Score = 60.1 bits (144), Expect(2) = 1e-14
 Identities = 30/53 (56%), Positives = 37/53 (69%)
 Frame = -2

Query: 232 HICRY*TRKQCRK*RNKERLQDIKPGYIIQLKVEVPENKRGVPTLKGIVIARR 74
           HI +   ++   + R K  + +IKPGYI+QLKVEVPENKR    LKGIVIARR
Sbjct: 160 HIMQILDKEAVEEVRAKREIPEIKPGYIVQLKVEVPENKRRTSVLKGIVIARR 212



 Score = 44.3 bits (103), Expect(2) = 1e-14
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = -3

Query: 72  NSGLNSTFRLSRLVAGVGVESVFP 1
           N+GLN+TFRL RLVAGVGVES+FP
Sbjct: 213 NAGLNTTFRLRRLVAGVGVESLFP 236


>ref|XP_002277262.1| PREDICTED: uncharacterized protein LOC100255272 [Vitis vinifera]
          Length = 243

 Score = 60.1 bits (144), Expect(2) = 1e-14
 Identities = 30/53 (56%), Positives = 37/53 (69%)
 Frame = -2

Query: 232 HICRY*TRKQCRK*RNKERLQDIKPGYIIQLKVEVPENKRGVPTLKGIVIARR 74
           HI +   ++   + R K  + +IKPGYI+QLKVEVPENKR    LKGIVIARR
Sbjct: 133 HIMQILDKEAVEEVRAKREIPEIKPGYIVQLKVEVPENKRRTSVLKGIVIARR 185



 Score = 44.3 bits (103), Expect(2) = 1e-14
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = -3

Query: 72  NSGLNSTFRLSRLVAGVGVESVFP 1
           N+GLN+TFRL RLVAGVGVES+FP
Sbjct: 186 NAGLNTTFRLRRLVAGVGVESLFP 209