BLASTX nr result

ID: Coptis25_contig00039494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039494
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323498.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002323498.1| predicted protein [Populus trichocarpa] gi|222868128|gb|EEF05259.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/52 (48%), Positives = 33/52 (63%)
 Frame = -2

Query: 173 HFVPIKLNKGNFLLWKSLFLPILRSNNLLGYADGSLPCPQKFVCNDKGEITN 18
           HF+ IKL + N+LLW++  +P LR  NL GY DGS+PCP   + N    I N
Sbjct: 23  HFITIKLTQDNYLLWRAQLIPYLRGQNLFGYLDGSVPCPAITIPNSSTHIPN 74


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