BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039429
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi...   167   9e-40
ref|XP_002318601.1| predicted protein [Populus trichocarpa] gi|2...   166   3e-39
emb|CBI28530.3| unnamed protein product [Vitis vinifera]              165   3e-39
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   164   1e-38
ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arab...   162   3e-38

>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
           gi|449477571|ref|XP_004155060.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
          Length = 487

 Score =  167 bits (423), Expect = 9e-40
 Identities = 73/109 (66%), Positives = 94/109 (86%)
 Frame = -2

Query: 526 GKGNMIVDEMIKEGVTPEPRFYHDLLGVLCGVERVGHALELFERMKKSGKGDYGSVYDLL 347
           GKG  IVDEMI+EG+TP+ +FY+DL+G+LCGVER  +ALELFE+MK+S  G YG VYD+L
Sbjct: 350 GKGREIVDEMIEEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVL 409

Query: 346 IPKLCRGGEFEKGRLLWDEAMKMGITLQCSSDVLDPTVTEVFMPNKKVE 200
           IPKLCRGGEFE GR LW+EAM MG++L CSS++LDP++T+VF P +K+E
Sbjct: 410 IPKLCRGGEFEMGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIE 458


>ref|XP_002318601.1| predicted protein [Populus trichocarpa] gi|222859274|gb|EEE96821.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  166 bits (419), Expect = 3e-39
 Identities = 75/110 (68%), Positives = 93/110 (84%)
 Frame = -2

Query: 526 GKGNMIVDEMIKEGVTPEPRFYHDLLGVLCGVERVGHALELFERMKKSGKGDYGSVYDLL 347
           GKGN IVDEMI +G+ P+ +FY++L+GVLCGVERV +ALELFERMK S  G YG VYD+L
Sbjct: 343 GKGNEIVDEMIGQGLLPDRKFYYNLIGVLCGVERVSYALELFERMKTSSLGGYGPVYDIL 402

Query: 346 IPKLCRGGEFEKGRLLWDEAMKMGITLQCSSDVLDPTVTEVFMPNKKVEE 197
           IPKLC+GG+FE+GR LW+EA  MG++  CSSDVLDP++TEVF P +KVEE
Sbjct: 403 IPKLCKGGDFERGRELWEEATAMGVSFSCSSDVLDPSITEVFKPRRKVEE 452


>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/111 (67%), Positives = 94/111 (84%)
 Frame = -2

Query: 526 GKGNMIVDEMIKEGVTPEPRFYHDLLGVLCGVERVGHALELFERMKKSGKGDYGSVYDLL 347
           GKGN IVDEMI+EG+ P+ +FY+DL+GVLCGVERV +ALE+FERMK+S  G YG VYD+L
Sbjct: 309 GKGNQIVDEMIEEGLVPDRKFYYDLIGVLCGVERVNYALEMFERMKRSSLGGYGPVYDVL 368

Query: 346 IPKLCRGGEFEKGRLLWDEAMKMGITLQCSSDVLDPTVTEVFMPNKKVEEV 194
           IPKLCR G+F KGR LWDEA ++G+ L CSS+VLDP++T+VF P +K EEV
Sbjct: 369 IPKLCRSGDFGKGRELWDEATRVGVLLHCSSEVLDPSITKVFKPARKDEEV 419


>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61370, mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  164 bits (414), Expect = 1e-38
 Identities = 74/110 (67%), Positives = 93/110 (84%)
 Frame = -2

Query: 526 GKGNMIVDEMIKEGVTPEPRFYHDLLGVLCGVERVGHALELFERMKKSGKGDYGSVYDLL 347
           GKGN IVDEMI+EG+ P+ +FY+DL+GVLCGVERV +ALE+FERMK+S  G YG VYD+L
Sbjct: 340 GKGNQIVDEMIEEGLVPDRKFYYDLIGVLCGVERVNYALEMFERMKRSSLGGYGPVYDVL 399

Query: 346 IPKLCRGGEFEKGRLLWDEAMKMGITLQCSSDVLDPTVTEVFMPNKKVEE 197
           IPKLCR G+F KGR LWDEA ++G+ L CSS+VLDP++T+VF P +K EE
Sbjct: 400 IPKLCRSGDFGKGRELWDEATRVGVLLHCSSEVLDPSITKVFKPARKDEE 449


>ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arabidopsis lyrata subsp.
           lyrata] gi|297312265|gb|EFH42689.1| hypothetical protein
           ARALYDRAFT_496296 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/113 (66%), Positives = 91/113 (80%)
 Frame = -2

Query: 526 GKGNMIVDEMIKEGVTPEPRFYHDLLGVLCGVERVGHALELFERMKKSGKGDYGSVYDLL 347
           GKGN IVDEMI+ G+ PE +FY+DL+GVLCGVERV  AL+LFE+MK+S    YG VYDLL
Sbjct: 339 GKGNQIVDEMIERGLRPEHKFYYDLIGVLCGVERVNFALQLFEKMKRSSVDGYGPVYDLL 398

Query: 346 IPKLCRGGEFEKGRLLWDEAMKMGITLQCSSDVLDPTVTEVFMPNKKVEEVSM 188
           IPKLC+GG FEKG+ LW+EAM + +TL CS  +LDP+VTEVF P KK EE +M
Sbjct: 399 IPKLCKGGNFEKGKELWEEAMSLNVTLSCSISLLDPSVTEVFKPMKKKEEAAM 451