BLASTX nr result

ID: Coptis25_contig00039416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039416
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280907.1| PREDICTED: exostosin-1-like [Vitis vinifera]      112   3e-23
emb|CAN68561.1| hypothetical protein VITISV_033101 [Vitis vinifera]   110   2e-22
ref|XP_002523753.1| transferase, transferring glycosyl groups, p...   105   4e-21
ref|XP_002330776.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_004169514.1| PREDICTED: exostosin-like 3-like, partial [C...    99   3e-19

>ref|XP_002280907.1| PREDICTED: exostosin-1-like [Vitis vinifera]
          Length = 328

 Score =  112 bits (280), Expect = 3e-23
 Identities = 59/100 (59%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
 Frame = +3

Query: 117 RSNQLTVIINGYSESRIHLLRSIAATYXXXXXXXXXXXXWGNTNTCLHTLTQLSNNLTF- 293
           RS+Q+TV++NGYSESRI LLRSIAATY            WGN +T   TL +LS+N T  
Sbjct: 41  RSDQITVLMNGYSESRIPLLRSIAATYAASPPVAAVVILWGNPSTPTRTLAELSHNFTIA 100

Query: 294 YSSGAPIALIRQPNESLNSRFLPRPSVITTRAVVICDDDV 413
           Y+  API+L+RQ ++SLN+RFLPRP  ITTR V+ICDDDV
Sbjct: 101 YTGAAPISLVRQASDSLNARFLPRP-FITTRGVIICDDDV 139


>emb|CAN68561.1| hypothetical protein VITISV_033101 [Vitis vinifera]
          Length = 328

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/100 (58%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
 Frame = +3

Query: 117 RSNQLTVIINGYSESRIHLLRSIAATYXXXXXXXXXXXXWGNTNTCLHTLTQLSNNLTF- 293
           RS+Q+TV++NGYSESRI LLRSIAATY            WGN +T   TL +LS+N T  
Sbjct: 41  RSDQITVLMNGYSESRIPLLRSIAATYAASPPVAAVVILWGNPSTPTRTLAELSHNFTIA 100

Query: 294 YSSGAPIALIRQPNESLNSRFLPRPSVITTRAVVICDDDV 413
           Y+  API+L+RQ ++SLN+RFLPRP  I TR V+ICDDDV
Sbjct: 101 YTGAAPISLVRQASDSLNARFLPRP-FIXTRGVIICDDDV 139


>ref|XP_002523753.1| transferase, transferring glycosyl groups, putative [Ricinus
           communis] gi|223537057|gb|EEF38693.1| transferase,
           transferring glycosyl groups, putative [Ricinus
           communis]
          Length = 349

 Score =  105 bits (262), Expect = 4e-21
 Identities = 60/102 (58%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
 Frame = +3

Query: 111 THRSNQLTVIINGYSESRIHLLRSIAATYXXXXXXXXXXXXWGNTNTCLHTLTQLSNNLT 290
           T R +Q+TV+INGYSESRI LL++IAATY            WGN +T L TL QL++NL+
Sbjct: 51  TLREDQITVLINGYSESRIPLLQTIAATYSASPLVSSVLVLWGNPSTPLKTLVQLAHNLS 110

Query: 291 FYSSG-APIALIRQPNESLNSRFLPRPSVITTRAVVICDDDV 413
             S G A I+LIRQP+ SLN RFLPR S I T+AV+ICDDDV
Sbjct: 111 LSSFGAATISLIRQPSSSLNDRFLPRSS-IGTQAVLICDDDV 151


>ref|XP_002330776.1| predicted protein [Populus trichocarpa] gi|222872578|gb|EEF09709.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  101 bits (251), Expect = 7e-20
 Identities = 56/100 (56%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
 Frame = +3

Query: 117 RSNQLTVIINGYSESRIHLLRSIAATYXXXXXXXXXXXXWGNTNTCLHTLTQLSNNLTFY 296
           RS+Q+TV++NGYSESRI LLRS+A+TY            WGN +T   TL +L++NL+  
Sbjct: 38  RSDQITVLMNGYSESRIPLLRSLASTYTSSPLVSSVLVLWGNPSTSAQTLARLAHNLSLS 97

Query: 297 SSG-APIALIRQPNESLNSRFLPRPSVITTRAVVICDDDV 413
           S G API+L+RQ + SLN RFLPR S I T AV+ICDDDV
Sbjct: 98  SFGPAPISLVRQRSNSLNDRFLPRFS-IGTHAVLICDDDV 136


>ref|XP_004169514.1| PREDICTED: exostosin-like 3-like, partial [Cucumis sativus]
          Length = 298

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 64/133 (48%), Positives = 80/133 (60%)
 Frame = +3

Query: 15  LLVSFFKI*LTMKKSSLTSCFFILLLSLNQVVTHRSNQLTVIINGYSESRIHLLRSIAAT 194
           LL+SF     ++ K +  +C      SL      RS+Q+TV+INGY ESRI LL+S+AA 
Sbjct: 11  LLLSFSTAVYSLHKETAAAC---AAESLPDRRNLRSDQITVLINGYYESRIPLLQSLAAR 67

Query: 195 YXXXXXXXXXXXXWGNTNTCLHTLTQLSNNLTFYSSGAPIALIRQPNESLNSRFLPRPSV 374
           Y            WGN +T   TLT+L+ NLT      PI+LIRQ + SLNSRFLPR S 
Sbjct: 68  YAASPFVHTVLILWGNPSTSTETLTKLAQNLT----TGPISLIRQSSNSLNSRFLPRKS- 122

Query: 375 ITTRAVVICDDDV 413
           I T AV+ICDDDV
Sbjct: 123 IQTFAVLICDDDV 135


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