BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039408
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   271   5e-71
emb|CBI30096.3| unnamed protein product [Vitis vinifera]              271   5e-71
ref|XP_002308898.1| condensin complex components subunit [Populu...   265   3e-69
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...   258   4e-67
ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis tha...   249   2e-64

>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  271 bits (692), Expect = 5e-71
 Identities = 132/172 (76%), Positives = 151/172 (87%), Gaps = 3/172 (1%)
 Frame = -2

Query: 510  SKRGSNRIYNLLPDILSRLSNQNLKEEVFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV 331
            SK+GSN IYNLLPDIL +L N+NLK E FCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV
Sbjct: 1073 SKKGSNPIYNLLPDILGKLCNRNLKRESFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV 1132

Query: 330  SDIKQWQDISYCLSLLTFTEKGMRKLMDSFKIYEHVLCEVSVMDNFKNIISKAKKFAKPD 151
            +D++QW+ +SYCLS L FTEKGM+KLM+SFK YEH L E SVMD+FKNIISK+KKFAKP+
Sbjct: 1133 TDVRQWEYVSYCLSQLAFTEKGMKKLMESFKTYEHALSEDSVMDHFKNIISKSKKFAKPE 1192

Query: 150  LKACIEEFEENLNKFHMEKKEQEATARNAQVHQQKVSSLEGIM---ESKEDC 4
            LK+CIEEFEE LNKFH+E+KEQE TARNAQVHQQKV SLE +M    + E+C
Sbjct: 1193 LKSCIEEFEEKLNKFHVERKEQEVTARNAQVHQQKVGSLESLMVDGSTAEEC 1244


>emb|CBI30096.3| unnamed protein product [Vitis vinifera]
          Length = 1290

 Score =  271 bits (692), Expect = 5e-71
 Identities = 132/172 (76%), Positives = 151/172 (87%), Gaps = 3/172 (1%)
 Frame = -2

Query: 510  SKRGSNRIYNLLPDILSRLSNQNLKEEVFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV 331
            SK+GSN IYNLLPDIL +L N+NLK E FCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV
Sbjct: 1004 SKKGSNPIYNLLPDILGKLCNRNLKRESFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV 1063

Query: 330  SDIKQWQDISYCLSLLTFTEKGMRKLMDSFKIYEHVLCEVSVMDNFKNIISKAKKFAKPD 151
            +D++QW+ +SYCLS L FTEKGM+KLM+SFK YEH L E SVMD+FKNIISK+KKFAKP+
Sbjct: 1064 TDVRQWEYVSYCLSQLAFTEKGMKKLMESFKTYEHALSEDSVMDHFKNIISKSKKFAKPE 1123

Query: 150  LKACIEEFEENLNKFHMEKKEQEATARNAQVHQQKVSSLEGIM---ESKEDC 4
            LK+CIEEFEE LNKFH+E+KEQE TARNAQVHQQKV SLE +M    + E+C
Sbjct: 1124 LKSCIEEFEEKLNKFHVERKEQEVTARNAQVHQQKVGSLESLMVDGSTAEEC 1175


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
            gi|222854874|gb|EEE92421.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  265 bits (677), Expect = 3e-69
 Identities = 129/168 (76%), Positives = 144/168 (85%)
 Frame = -2

Query: 510  SKRGSNRIYNLLPDILSRLSNQNLKEEVFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV 331
            SK+GSN IYNLLPDIL +LSNQ LK E FCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV
Sbjct: 1078 SKKGSNPIYNLLPDILGKLSNQELKRETFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV 1137

Query: 330  SDIKQWQDISYCLSLLTFTEKGMRKLMDSFKIYEHVLCEVSVMDNFKNIISKAKKFAKPD 151
             D +QW+ ISYCLS L FTEKGM+KL+DSFK +EHVL E SVMDNFK+II KAKKFAKP+
Sbjct: 1138 IDTRQWEYISYCLSQLAFTEKGMKKLIDSFKTFEHVLSEDSVMDNFKSIIIKAKKFAKPE 1197

Query: 150  LKACIEEFEENLNKFHMEKKEQEATARNAQVHQQKVSSLEGIMESKED 7
            LK CIEEFEE L KFHMEKKEQE TARNAQ+HQQK+  +EG   ++ +
Sbjct: 1198 LKLCIEEFEEKLTKFHMEKKEQEVTARNAQIHQQKIGGMEGCAVARNE 1245


>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
            condensin, putative [Ricinus communis]
          Length = 1346

 Score =  258 bits (659), Expect = 4e-67
 Identities = 124/168 (73%), Positives = 147/168 (87%)
 Frame = -2

Query: 510  SKRGSNRIYNLLPDILSRLSNQNLKEEVFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV 331
            SK+GSN +YNLLPDILS+LS QNL  E FCNIMQFLIGSIKKDKQME+LVEKLCNRFSGV
Sbjct: 1078 SKKGSNPVYNLLPDILSKLSAQNLNRESFCNIMQFLIGSIKKDKQMEALVEKLCNRFSGV 1137

Query: 330  SDIKQWQDISYCLSLLTFTEKGMRKLMDSFKIYEHVLCEVSVMDNFKNIISKAKKFAKPD 151
            +D+KQW+ ISYCLS L FTEKG+RKL++SFK YEH L E SV D+FK+II+KAKKFAKP+
Sbjct: 1138 TDVKQWEYISYCLSQLAFTEKGIRKLIESFKSYEHALLEDSVADHFKSIINKAKKFAKPE 1197

Query: 150  LKACIEEFEENLNKFHMEKKEQEATARNAQVHQQKVSSLEGIMESKED 7
            LK CIEEFEE L KFHMEKKEQE TARNAQ+H+QKV ++E ++ ++ +
Sbjct: 1198 LKLCIEEFEEKLQKFHMEKKEQEVTARNAQIHRQKVENVERVVMARNE 1245


>ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis thaliana]
            gi|332646086|gb|AEE79607.1| condensin complex subunit 1
            [Arabidopsis thaliana]
          Length = 1415

 Score =  249 bits (636), Expect = 2e-64
 Identities = 119/162 (73%), Positives = 143/162 (88%)
 Frame = -2

Query: 510  SKRGSNRIYNLLPDILSRLSNQNLKEEVFCNIMQFLIGSIKKDKQMESLVEKLCNRFSGV 331
            SK+GSN IYNLLPDIL +LSN+NL+ E FCN+MQFLIGSIKKDKQME+LVEKLCNRFSGV
Sbjct: 1069 SKKGSNPIYNLLPDILGQLSNRNLERESFCNVMQFLIGSIKKDKQMEALVEKLCNRFSGV 1128

Query: 330  SDIKQWQDISYCLSLLTFTEKGMRKLMDSFKIYEHVLCEVSVMDNFKNIISKAKKFAKPD 151
            +D KQW+ ISY LSLLTFTEKG++KL++SFK YEH L E  V +NF++II+K KKFAKP+
Sbjct: 1129 TDGKQWEYISYSLSLLTFTEKGIKKLIESFKSYEHALAEDLVTENFRSIINKGKKFAKPE 1188

Query: 150  LKACIEEFEENLNKFHMEKKEQEATARNAQVHQQKVSSLEGI 25
            LKACIEEFEE +NKFHMEKKEQE TARNA+VH++K  ++E +
Sbjct: 1189 LKACIEEFEEKINKFHMEKKEQEETARNAEVHREKTKTMESL 1230