BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039403
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containi...   199   2e-49
emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]   194   6e-48
gb|EAZ16420.1| hypothetical protein OsJ_31889 [Oryza sativa Japo...   143   1e-32
ref|NP_001064855.1| Os10g0477200 [Oryza sativa Japonica Group] g...   143   1e-32
ref|XP_003574060.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31

>ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Vitis vinifera]
          Length = 700

 Score =  199 bits (505), Expect = 2e-49
 Identities = 94/155 (60%), Positives = 115/155 (74%), Gaps = 1/155 (0%)
 Frame = -1

Query: 462  YAMAGMWESGSNLKSMMTGRRLLSIKECSSIDVGNMIYKFKGGESSHLKLEDIMYMWDKM 283
            Y  +GMW+   NL+S M GR+LL+IKECS + VG+ I  FKGGESSH +LE+I+  WDK+
Sbjct: 543  YVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHICTFKGGESSHPELEEILEAWDKL 602

Query: 282  ASEMEHVGFLPLDPVLTGEGN-LNPISCFHSEKLAICFGLITLDANSPVRISKNLRMCID 106
            A +ME  G+ PLDPV   E   L+P SC H+EKLAICFG+I+ +   PV +SKN+RMCID
Sbjct: 603  ARKMELSGYFPLDPVFDDEEKELDPFSCLHTEKLAICFGIISSNTYRPVHVSKNIRMCID 662

Query: 105  CHTSVKHISRIAGREIFVMDGSFYHHFKDGICRCQ 1
            CHTS K IS+I GREIFV D  FYHH KDGIC CQ
Sbjct: 663  CHTSAKLISKIDGREIFVKDVCFYHHMKDGICSCQ 697


>emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  194 bits (493), Expect = 6e-48
 Identities = 92/155 (59%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
 Frame = -1

Query: 462  YAMAGMWESGSNLKSMMTGRRLLSIKECSSIDVGNMIYKFKGGESSHLKLEDIMYMWDKM 283
            Y  +GMW+   NL+S M GR+LL+IKECS + VG+    FKGGESSH +LE+I+  WD +
Sbjct: 852  YVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHXCTFKGGESSHPELEEILETWDXL 911

Query: 282  ASEMEHVGFLPLDPVLTGEGN-LNPISCFHSEKLAICFGLITLDANSPVRISKNLRMCID 106
            A +ME  G+ PLDPV   E   L+P SC H+EKLAICFG+I+ +   PV +SKN+RMCID
Sbjct: 912  ARKMELSGYFPLDPVFDDEEKELDPFSCLHTEKLAICFGIISSNXYRPVHVSKNIRMCID 971

Query: 105  CHTSVKHISRIAGREIFVMDGSFYHHFKDGICRCQ 1
            CHTS K IS+I GREIFV D  FYHH KDGIC CQ
Sbjct: 972  CHTSAKLISKIDGREIFVKDVCFYHHMKDGICXCQ 1006


>gb|EAZ16420.1| hypothetical protein OsJ_31889 [Oryza sativa Japonica Group]
          Length = 664

 Score =  143 bits (361), Expect = 1e-32
 Identities = 65/153 (42%), Positives = 98/153 (64%)
 Frame = -1

Query: 462 YAMAGMWESGSNLKSMMTGRRLLSIKECSSIDVGNMIYKFKGGESSHLKLEDIMYMWDKM 283
           YA  G+WES   L+  MT + L   ++CS + +G  ++ F+ G+SSH   E I+  W+ +
Sbjct: 508 YADNGLWESTEALRVAMTEQGLNVERQCSRLYLGTDVHTFEAGDSSHPAFEKILSTWNDL 567

Query: 282 ASEMEHVGFLPLDPVLTGEGNLNPISCFHSEKLAICFGLITLDANSPVRISKNLRMCIDC 103
           +  ME  G+ P D         +P+SC H+E++A+C+GLI++  +  +RISKN RMC++C
Sbjct: 568 SDRMEQSGYPPQDIEPYSNAEADPLSCQHTERIALCYGLISVRVHDLIRISKNFRMCMEC 627

Query: 102 HTSVKHISRIAGREIFVMDGSFYHHFKDGICRC 4
           H+S+K ISR   REIFV DG  YHHF++G C C
Sbjct: 628 HSSIKFISRDMNREIFVSDGCTYHHFQNGACSC 660


>ref|NP_001064855.1| Os10g0477200 [Oryza sativa Japonica Group]
            gi|110289259|gb|AAP54276.2| PPR986-12, putative,
            expressed [Oryza sativa Japonica Group]
            gi|110289260|gb|ABG66139.1| PPR986-12, putative,
            expressed [Oryza sativa Japonica Group]
            gi|113639464|dbj|BAF26769.1| Os10g0477200 [Oryza sativa
            Japonica Group] gi|215695099|dbj|BAG90290.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 699

 Score =  143 bits (361), Expect = 1e-32
 Identities = 65/153 (42%), Positives = 98/153 (64%)
 Frame = -1

Query: 462  YAMAGMWESGSNLKSMMTGRRLLSIKECSSIDVGNMIYKFKGGESSHLKLEDIMYMWDKM 283
            YA  G+WES   L+  MT + L   ++CS + +G  ++ F+ G+SSH   E I+  W+ +
Sbjct: 543  YADNGLWESTEALRVAMTEQGLNVERQCSRLYLGTDVHTFEAGDSSHPAFEKILSTWNDL 602

Query: 282  ASEMEHVGFLPLDPVLTGEGNLNPISCFHSEKLAICFGLITLDANSPVRISKNLRMCIDC 103
            +  ME  G+ P D         +P+SC H+E++A+C+GLI++  +  +RISKN RMC++C
Sbjct: 603  SDRMEQSGYPPQDIEPYSNAEADPLSCQHTERIALCYGLISVRVHDLIRISKNFRMCMEC 662

Query: 102  HTSVKHISRIAGREIFVMDGSFYHHFKDGICRC 4
            H+S+K ISR   REIFV DG  YHHF++G C C
Sbjct: 663  HSSIKFISRDMNREIFVSDGCTYHHFQNGACSC 695


>ref|XP_003574060.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like
            [Brachypodium distachyon]
          Length = 735

 Score =  139 bits (351), Expect = 2e-31
 Identities = 62/153 (40%), Positives = 97/153 (63%)
 Frame = -1

Query: 462  YAMAGMWESGSNLKSMMTGRRLLSIKECSSIDVGNMIYKFKGGESSHLKLEDIMYMWDKM 283
            YA  G+W+   +++  MT + L   ++CS + +G  +  F+ G  SH   E+I+  W  +
Sbjct: 579  YANNGLWDFTDSVRDAMTEQGLHVERQCSLLYLGTNVDSFEAGVMSHPAFENILNAWKDV 638

Query: 282  ASEMEHVGFLPLDPVLTGEGNLNPISCFHSEKLAICFGLITLDANSPVRISKNLRMCIDC 103
            AS ME  G+ P D        ++P+SC H+E++A+C+GLI++ A+ P+R+SKN RMC +C
Sbjct: 639  ASRMEQSGYAPQDNEPYCNVEVDPLSCHHTERIAVCYGLISMCAHEPIRVSKNFRMCKEC 698

Query: 102  HTSVKHISRIAGREIFVMDGSFYHHFKDGICRC 4
            H+S+K ISR   R+IF+ DG  YHHF +G C C
Sbjct: 699  HSSMKFISRDKNRQIFISDGCTYHHFSNGSCSC 731