BLASTX nr result

ID: Coptis25_contig00039395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039395
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282041.2| PREDICTED: probable actin-related protein 2/...    80   2e-13
emb|CBI23704.3| unnamed protein product [Vitis vinifera]               80   2e-13
emb|CAN66172.1| hypothetical protein VITISV_000730 [Vitis vinifera]    80   2e-13
ref|XP_002528374.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_002314500.1| predicted protein [Populus trichocarpa] gi|2...    79   7e-13

>ref|XP_002282041.2| PREDICTED: probable actin-related protein 2/3 complex subunit
           2-like [Vitis vinifera]
          Length = 368

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/71 (56%), Positives = 55/71 (77%)
 Frame = +1

Query: 199 VQASASDPHHIHLSVSTLLQSPGVPITNGLQNSTIQTLKRVYSDVVEIVEPPQEGYQLTL 378
           VQ+SASDPH  +LS++T L S GV  ++GL + TI+ +K + SDV+EIVEP +EGYQLTL
Sbjct: 41  VQSSASDPHDTYLSIATPLLSQGVLPSHGLSHYTIEMIKGICSDVLEIVEPAREGYQLTL 100

Query: 379 RIRFSKLPQRK 411
           R+  +K+PQ K
Sbjct: 101 RLDLAKIPQGK 111


>emb|CBI23704.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/71 (56%), Positives = 55/71 (77%)
 Frame = +1

Query: 199 VQASASDPHHIHLSVSTLLQSPGVPITNGLQNSTIQTLKRVYSDVVEIVEPPQEGYQLTL 378
           VQ+SASDPH  +LS++T L S GV  ++GL + TI+ +K + SDV+EIVEP +EGYQLTL
Sbjct: 41  VQSSASDPHDTYLSIATPLLSQGVLPSHGLSHYTIEMIKGICSDVLEIVEPAREGYQLTL 100

Query: 379 RIRFSKLPQRK 411
           R+  +K+PQ K
Sbjct: 101 RLDLAKIPQGK 111


>emb|CAN66172.1| hypothetical protein VITISV_000730 [Vitis vinifera]
          Length = 349

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/71 (56%), Positives = 55/71 (77%)
 Frame = +1

Query: 199 VQASASDPHHIHLSVSTLLQSPGVPITNGLQNSTIQTLKRVYSDVVEIVEPPQEGYQLTL 378
           VQ+SASDPH  +LS++T L S GV  ++GL + TI+ +K + SDV+EIVEP +EGYQLTL
Sbjct: 41  VQSSASDPHDTYLSIATPLLSQGVLPSHGLSHYTIEMIKGICSDVLEIVEPAREGYQLTL 100

Query: 379 RIRFSKLPQRK 411
           R+  +K+PQ K
Sbjct: 101 RLDLAKIPQGK 111


>ref|XP_002528374.1| conserved hypothetical protein [Ricinus communis]
           gi|223532242|gb|EEF34046.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 355

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/71 (54%), Positives = 51/71 (71%)
 Frame = +1

Query: 199 VQASASDPHHIHLSVSTLLQSPGVPITNGLQNSTIQTLKRVYSDVVEIVEPPQEGYQLTL 378
           +Q+SA+DPHH  LS+ST L S GV  + G    T + +K V SD VEIVEPP+EGYQLTL
Sbjct: 41  IQSSATDPHHKFLSISTPLLSQGVLQSYGFSPYTTRMIKEVCSDAVEIVEPPREGYQLTL 100

Query: 379 RIRFSKLPQRK 411
           ++ F+K+P  K
Sbjct: 101 KLNFAKIPSEK 111


>ref|XP_002314500.1| predicted protein [Populus trichocarpa] gi|222863540|gb|EEF00671.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 38/68 (55%), Positives = 53/68 (77%)
 Frame = +1

Query: 199 VQASASDPHHIHLSVSTLLQSPGVPITNGLQNSTIQTLKRVYSDVVEIVEPPQEGYQLTL 378
           VQ+SA+DP H +LS+ST L S G  ++ GL + T+Q +K+V SD VEIVEP +EGYQLTL
Sbjct: 22  VQSSAADPQHNYLSISTPLLSQGALLSYGLSSYTMQMVKQVCSDAVEIVEPAKEGYQLTL 81

Query: 379 RIRFSKLP 402
           ++ F+K+P
Sbjct: 82  KLNFAKVP 89


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