BLASTX nr result

ID: Coptis25_contig00039380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039380
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620405.1| Kinesin-like protein KIF3A [Medicago truncat...   217   7e-55
ref|XP_002318539.1| predicted protein [Populus trichocarpa] gi|2...   217   9e-55
ref|XP_002321490.1| predicted protein [Populus trichocarpa] gi|2...   214   4e-54
emb|CBI15491.3| unnamed protein product [Vitis vinifera]              214   8e-54
ref|XP_002279228.1| PREDICTED: uncharacterized protein LOC100266...   214   8e-54

>ref|XP_003620405.1| Kinesin-like protein KIF3A [Medicago truncatula]
           gi|355495420|gb|AES76623.1| Kinesin-like protein KIF3A
           [Medicago truncatula]
          Length = 945

 Score =  217 bits (553), Expect = 7e-55
 Identities = 105/131 (80%), Positives = 117/131 (89%)
 Frame = -1

Query: 393 TRTTPGTPASKMDRTPASTPGGPKAREEKIVVTVRLRPLSKRELNLKDQVAWECVDDQTI 214
           T  TPGTPASK+DRTP STPGGP+ARE+KIVVTVRLRPL++RE   KDQVAW+C+DD TI
Sbjct: 2   TVKTPGTPASKIDRTPVSTPGGPRAREDKIVVTVRLRPLNRREQLAKDQVAWDCIDDYTI 61

Query: 213 IYKPPSQERSIASASYTFDKVFGPVSETEAVYEEGVKNVALSALMGINATIFAYGQTSSG 34
           +YKPP  ER+   AS+TFDKVFGP S T+AVYEEGVKNVALSALMGINAT+FAYGQTSSG
Sbjct: 62  MYKPPPNERATQPASFTFDKVFGPASITDAVYEEGVKNVALSALMGINATVFAYGQTSSG 121

Query: 33  KTYTMRGITEK 1
           KTYTMRGITEK
Sbjct: 122 KTYTMRGITEK 132


>ref|XP_002318539.1| predicted protein [Populus trichocarpa] gi|222859212|gb|EEE96759.1|
           predicted protein [Populus trichocarpa]
          Length = 964

 Score =  217 bits (552), Expect = 9e-55
 Identities = 105/131 (80%), Positives = 118/131 (90%)
 Frame = -1

Query: 393 TRTTPGTPASKMDRTPASTPGGPKAREEKIVVTVRLRPLSKRELNLKDQVAWECVDDQTI 214
           T  TPGTPASK+DRTPA+TPGGPKA+EEKIVVTVRLRPL+K+E   KDQ+AW+CVDD TI
Sbjct: 2   TLRTPGTPASKIDRTPATTPGGPKAKEEKIVVTVRLRPLNKKEQLAKDQIAWDCVDDHTI 61

Query: 213 IYKPPSQERSIASASYTFDKVFGPVSETEAVYEEGVKNVALSALMGINATIFAYGQTSSG 34
           ++KPP QER+   AS+ FDKVFGP S TEAVYE+GVKNVALSALMGINATIFAYGQTSSG
Sbjct: 62  VFKPPPQERAAQPASFIFDKVFGPSSITEAVYEDGVKNVALSALMGINATIFAYGQTSSG 121

Query: 33  KTYTMRGITEK 1
           KTYTMRGIT+K
Sbjct: 122 KTYTMRGITDK 132


>ref|XP_002321490.1| predicted protein [Populus trichocarpa] gi|222868486|gb|EEF05617.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score =  214 bits (546), Expect = 4e-54
 Identities = 106/131 (80%), Positives = 117/131 (89%)
 Frame = -1

Query: 393 TRTTPGTPASKMDRTPASTPGGPKAREEKIVVTVRLRPLSKRELNLKDQVAWECVDDQTI 214
           T  TPGTPASK+DRTPA+TPGG KA+EEKIVVTVRLRPL+K+E   KDQVAW+CVDD TI
Sbjct: 2   TIRTPGTPASKIDRTPATTPGGAKAKEEKIVVTVRLRPLNKKEQLAKDQVAWDCVDDHTI 61

Query: 213 IYKPPSQERSIASASYTFDKVFGPVSETEAVYEEGVKNVALSALMGINATIFAYGQTSSG 34
           ++KPPSQER+   AS+ FDKVF P S TEAVYE+GVKNVALSALMGINATIFAYGQTSSG
Sbjct: 62  VFKPPSQERAAQPASFVFDKVFDPSSITEAVYEDGVKNVALSALMGINATIFAYGQTSSG 121

Query: 33  KTYTMRGITEK 1
           KTYTMRGITEK
Sbjct: 122 KTYTMRGITEK 132


>emb|CBI15491.3| unnamed protein product [Vitis vinifera]
          Length = 849

 Score =  214 bits (544), Expect = 8e-54
 Identities = 105/131 (80%), Positives = 114/131 (87%)
 Frame = -1

Query: 393 TRTTPGTPASKMDRTPASTPGGPKAREEKIVVTVRLRPLSKRELNLKDQVAWECVDDQTI 214
           T  TP TPASK DRTP STPGG + +EEKIVVTVRLRPLSK+E + KDQVAW+C+DD TI
Sbjct: 2   TVRTPSTPASKTDRTPVSTPGGSRVKEEKIVVTVRLRPLSKKEQSAKDQVAWDCIDDHTI 61

Query: 213 IYKPPSQERSIASASYTFDKVFGPVSETEAVYEEGVKNVALSALMGINATIFAYGQTSSG 34
           ++KPP QERS   AS+TFDKVFGP S TE VYEEGVKNVALSALMGINATIFAYGQTSSG
Sbjct: 62  VFKPPPQERSPQLASFTFDKVFGPASLTETVYEEGVKNVALSALMGINATIFAYGQTSSG 121

Query: 33  KTYTMRGITEK 1
           KTYTMRGITEK
Sbjct: 122 KTYTMRGITEK 132


>ref|XP_002279228.1| PREDICTED: uncharacterized protein LOC100266348 [Vitis vinifera]
          Length = 962

 Score =  214 bits (544), Expect = 8e-54
 Identities = 105/131 (80%), Positives = 114/131 (87%)
 Frame = -1

Query: 393 TRTTPGTPASKMDRTPASTPGGPKAREEKIVVTVRLRPLSKRELNLKDQVAWECVDDQTI 214
           T  TP TPASK DRTP STPGG + +EEKIVVTVRLRPLSK+E + KDQVAW+C+DD TI
Sbjct: 2   TVRTPSTPASKTDRTPVSTPGGSRVKEEKIVVTVRLRPLSKKEQSAKDQVAWDCIDDHTI 61

Query: 213 IYKPPSQERSIASASYTFDKVFGPVSETEAVYEEGVKNVALSALMGINATIFAYGQTSSG 34
           ++KPP QERS   AS+TFDKVFGP S TE VYEEGVKNVALSALMGINATIFAYGQTSSG
Sbjct: 62  VFKPPPQERSPQLASFTFDKVFGPASLTETVYEEGVKNVALSALMGINATIFAYGQTSSG 121

Query: 33  KTYTMRGITEK 1
           KTYTMRGITEK
Sbjct: 122 KTYTMRGITEK 132


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