BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039357
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    59   4e-07

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
 Frame = +1

Query: 202 KELRNAAAVHLMVQLWKTRNKILFEDKKLNTTQLKNDIIKGV-RAAGLLTIGTMFNTMED 378
           + + N+A VH+M  +W   N   F+  +   + L N I+  V R + +L I    ++M+D
Sbjct: 162 QHVMNSAIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQD 221

Query: 379 LDLPTFFNLKGRDKKIN-IREVIWFAPQWGVVKANTDGSVLGNP 507
             L   F++  +  ++N  RE+IW  P  G +K N DGSV+G+P
Sbjct: 222 FKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSP 265