BLASTX nr result

ID: Coptis25_contig00039333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039333
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR10301.1| pathogen-related protein STH-2 [Salvia miltiorrhiza]    95   5e-18
ref|NP_001234122.1| Pathogenesis-related protein STH-2-like [Sol...    85   5e-15
ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
gb|AAU00066.1| pathogenesis-related protein 10 [Solanum virginia...    83   2e-14
ref|XP_003632378.1| PREDICTED: LOW QUALITY PROTEIN: major allerg...    83   2e-14

>gb|ABR10301.1| pathogen-related protein STH-2 [Salvia miltiorrhiza]
          Length = 160

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/91 (48%), Positives = 63/91 (69%)
 Frame = +3

Query: 6   GCVYQANFPEGSEVSYIKHRLDEVDPVNLVCKATTFEGHALGNKHAKICYELKFEESGDG 185
           G ++Q NFPEG+   Y+K R+DE+D      K T  EG  LG+K  KICY++KFE++ DG
Sbjct: 52  GAIFQTNFPEGAHFKYMKCRVDEIDHEKHSIKYTLIEGDMLGDKLEKICYDMKFEDTEDG 111

Query: 186 GCVVKVKTDYHSKSHGHGLTDEEVEERKEHN 278
           GCVVKV ++YH+K  G+ L DE+++  KE +
Sbjct: 112 GCVVKVTSEYHTKG-GYELADEDLKGAKEQS 141


>ref|NP_001234122.1| Pathogenesis-related protein STH-2-like [Solanum lycopersicum]
           gi|62751099|dbj|BAD95797.1| similar to
           pathogenesis-related protein STH-2 [Solanum
           lycopersicum]
          Length = 155

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/90 (44%), Positives = 58/90 (64%)
 Frame = +3

Query: 6   GCVYQANFPEGSEVSYIKHRLDEVDPVNLVCKATTFEGHALGNKHAKICYELKFEESGDG 185
           G + + NF EG  + Y+KH++  +D  NLV K +  EG  LG+K   I +++KFE +G+G
Sbjct: 47  GSIKKINFVEGGPIKYLKHKIHAIDDKNLVTKYSLIEGDVLGDKLESITHDVKFEPAGNG 106

Query: 186 GCVVKVKTDYHSKSHGHGLTDEEVEERKEH 275
           GCV K KT+YH+K   + L DEE  E K+H
Sbjct: 107 GCVCKTKTEYHTKG-DYVLKDEEHNEGKKH 135


>ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|222838567|gb|EEE76932.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 36/70 (51%), Positives = 48/70 (68%)
 Frame = +3

Query: 6   GCVYQANFPEGSEVSYIKHRLDEVDPVNLVCKATTFEGHALGNKHAKICYELKFEESGDG 185
           G + Q NF EG+++ Y+KHR+DE+D VNLVCK T  EG +LG K   I YE++FE   DG
Sbjct: 52  GSIEQVNFTEGTDIKYVKHRIDELDRVNLVCKYTMIEGDSLGEKLESIAYEVRFEVGSDG 111

Query: 186 GCVVKVKTDY 215
           GC  K+ + Y
Sbjct: 112 GCDCKMTSSY 121


>gb|AAU00066.1| pathogenesis-related protein 10 [Solanum virginianum]
          Length = 160

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/83 (46%), Positives = 53/83 (63%)
 Frame = +3

Query: 6   GCVYQANFPEGSEVSYIKHRLDEVDPVNLVCKATTFEGHALGNKHAKICYELKFEESGDG 185
           G + Q NF EG  + Y+KH++  +D  NL  K +  EG  LG+K   I Y++KFE SGDG
Sbjct: 52  GSIKQMNFVEGGPIKYLKHKIHVIDDKNLETKYSLIEGDVLGDKLESINYDIKFEASGDG 111

Query: 186 GCVVKVKTDYHSKSHGHGLTDEE 254
           GCV K  T+YH+K   H +T+EE
Sbjct: 112 GCVCKTTTEYHTKG-DHVITEEE 133


>ref|XP_003632378.1| PREDICTED: LOW QUALITY PROTEIN: major allergen Pru ar 1-like [Vitis
           vinifera]
          Length = 204

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/89 (46%), Positives = 53/89 (59%)
 Frame = +3

Query: 6   GCVYQANFPEGSEVSYIKHRLDEVDPVNLVCKATTFEGHALGNKHAKICYELKFEESGDG 185
           G + Q NFPEGS   Y+KHR+D +D  N  CK T  EG  LG+    I YE+KFE SG G
Sbjct: 98  GSIKQTNFPEGSHFKYLKHRIDAIDHDNYSCKYTLIEGEVLGDTLESISYEVKFEASGSG 157

Query: 186 GCVVKVKTDYHSKSHGHGLTDEEVEERKE 272
             V K+ + YHSK     L DE+++  K+
Sbjct: 158 SSVCKMTSHYHSKIE---LKDEDIKTGKD 183


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