BLASTX nr result

ID: Coptis25_contig00039321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039321
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333891.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11

>ref|XP_002333891.1| predicted protein [Populus trichocarpa] gi|222838892|gb|EEE77243.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/61 (60%), Positives = 47/61 (77%)
 Frame = +2

Query: 56  PRKKNSPAL*PTDPVDHIIGRERVTLEVNDQRCPLITTMRLVPLFVDSAIHIHAEIHAGL 235
           PRKK      P+  + +I  RERVTLEVNDQRCP+ITTMRLVPL VDSA++++ E++AG 
Sbjct: 82  PRKKKRRDPLPSRLMPYITERERVTLEVNDQRCPIITTMRLVPLLVDSAMNMNEEMNAGS 141

Query: 236 F 238
           F
Sbjct: 142 F 142


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