BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039313
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus ...   114   8e-24
ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g...   113   2e-23
ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g...   111   5e-23
ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g...   111   5e-23
ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...   106   2e-21

>ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 698

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 12/138 (8%)
 Frame = -3

Query: 378 ITLKKDFKGEENEVTSAQHGLIRVLERVLEVFPT------------INNCRLLADTSQIG 235
           I  K   + EE +V+ AQ GLIRV ER+LEV               + +CR+LA + Q G
Sbjct: 111 IVSKVRVESEEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAG 170

Query: 234 YMIGKSGSRIKSIEKDIGARIRVCVERCPTCALPNDELIEITGDSLAVKKATLAISQCLQ 55
            +IGK G  ++ I KD G +IRV  ++ P CA PN+E+IEI GD L+VKKA +A+S+CLQ
Sbjct: 171 SVIGKGGKVVEKIRKDCGVKIRVLTDKLPVCAGPNEEMIEIEGDILSVKKALIAVSRCLQ 230

Query: 54  DSPPLDRAQMAGSNSFMA 1
           D  P+D+ ++  S  F A
Sbjct: 231 DCQPVDKPRVGSSKYFEA 248


>ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 591

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 9/137 (6%)
 Frame = -3

Query: 390 PKKTITLKKDFKGEENEVTSAQHGLIRVLERVL---------EVFPTINNCRLLADTSQI 238
           P + I +       + EV++AQ  L++V +RVL         EV   + +CRLLADTSQ+
Sbjct: 68  PDRVILVSAPAAASDGEVSTAQVALLKVFDRVLDVAAETAGTEVGDRVVSCRLLADTSQV 127

Query: 237 GYMIGKSGSRIKSIEKDIGARIRVCVERCPTCALPNDELIEITGDSLAVKKATLAISQCL 58
           G +IGK+G  ++ I  D G +IRV  E  P C  P+DE++E+ G   +VKKA +A+S CL
Sbjct: 128 GAVIGKAGKVVEKIRMDTGCKIRVLNEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCL 187

Query: 57  QDSPPLDRAQMAGSNSF 7
           QD PP DR +M GS  +
Sbjct: 188 QDCPPPDRTKMTGSRHY 204


>ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 643

 Score =  111 bits (278), Expect = 5e-23
 Identities = 61/143 (42%), Positives = 87/143 (60%), Gaps = 13/143 (9%)
 Frame = -3

Query: 423 ERVIHIFSSELPKKTITLKKDF--KGEENEVTSAQHGLIRVLERVLEVFPTINN------ 268
           +RV+ +  S      + L+++    GEE E + AQ GL++V ER+LEV   I        
Sbjct: 102 DRVVTVIGSPALTSRVFLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAE 161

Query: 267 -----CRLLADTSQIGYMIGKSGSRIKSIEKDIGARIRVCVERCPTCALPNDELIEITGD 103
                CRLLAD +Q+G +IGK G  ++ I K+ G RIRV  ++ P CA P+DE+IEI GD
Sbjct: 162 VGVVYCRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGD 221

Query: 102 SLAVKKATLAISQCLQDSPPLDR 34
             A+KKA LA+S+ LQD PP ++
Sbjct: 222 VWAIKKALLAVSRRLQDCPPSEK 244


>ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 658

 Score =  111 bits (278), Expect = 5e-23
 Identities = 61/143 (42%), Positives = 87/143 (60%), Gaps = 13/143 (9%)
 Frame = -3

Query: 423 ERVIHIFSSELPKKTITLKKDF--KGEENEVTSAQHGLIRVLERVLEVFPTINN------ 268
           +RV+ +  S      + L+++    GEE E + AQ GL++V ER+LEV   I        
Sbjct: 97  DRVVTVIGSPALTSRVFLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAE 156

Query: 267 -----CRLLADTSQIGYMIGKSGSRIKSIEKDIGARIRVCVERCPTCALPNDELIEITGD 103
                CRLLAD +Q+G +IGK G  ++ I K+ G RIRV  ++ P CA P+DE+IEI GD
Sbjct: 157 VGVVYCRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGD 216

Query: 102 SLAVKKATLAISQCLQDSPPLDR 34
             A+KKA LA+S+ LQD PP ++
Sbjct: 217 VWAIKKALLAVSRRLQDCPPSEK 239


>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 648

 Score =  106 bits (265), Expect = 2e-21
 Identities = 59/143 (41%), Positives = 91/143 (63%), Gaps = 9/143 (6%)
 Frame = -3

Query: 420 RVIHIFSSELPKKTITLKKDFKGEENEVTSAQHGLIRVLERVLEVFPTIN--------NC 265
           RVI + +     + I L+     EE E ++AQ  ++RV ER+LEV   ++        +C
Sbjct: 96  RVILVIAPASVNRRIALQGS--SEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSC 153

Query: 264 RLLADTSQIGYMIGKSGSRIKSIEKDIGARIRVCV-ERCPTCALPNDELIEITGDSLAVK 88
           RLLA+TSQ+G +IGK G  ++ I ++ G++I+V   E+ PTCA   DE++EI GD LAVK
Sbjct: 154 RLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVK 213

Query: 87  KATLAISQCLQDSPPLDRAQMAG 19
           KA +A+S+ LQD P +D+ ++ G
Sbjct: 214 KALVAVSRRLQDCPNVDKTKLIG 236