BLASTX nr result

ID: Coptis25_contig00039307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039307
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063029.1| Os09g0373000 [Oryza sativa Japonica Group] g...   120   1e-25
ref|XP_002462297.1| hypothetical protein SORBIDRAFT_02g023450 [S...   119   2e-25
ref|XP_003574476.1| PREDICTED: brain protein 44-like protein-lik...   119   3e-25
ref|XP_003530308.1| PREDICTED: brain protein 44-like protein-lik...   119   3e-25
ref|XP_002463699.1| hypothetical protein SORBIDRAFT_01g004480 [S...   118   6e-25

>ref|NP_001063029.1| Os09g0373000 [Oryza sativa Japonica Group]
           gi|49387802|dbj|BAD26367.1| brain protein 44-like [Oryza
           sativa Japonica Group] gi|113631262|dbj|BAF24943.1|
           Os09g0373000 [Oryza sativa Japonica Group]
           gi|215765123|dbj|BAG86820.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218202048|gb|EEC84475.1| hypothetical protein
           OsI_31133 [Oryza sativa Indica Group]
           gi|222641459|gb|EEE69591.1| hypothetical protein
           OsJ_29139 [Oryza sativa Japonica Group]
          Length = 107

 Score =  120 bits (300), Expect = 1e-25
 Identities = 56/76 (73%), Positives = 58/76 (76%)
 Frame = +3

Query: 141 MSPVFKAFLNSPVGPKTTHFWGPLXXXXXXXXXXXDMQKPPEMISGKMTAVMCVYSGLCM 320
           MS   KAFLNSPVGPKTTHFWGP+           DM KPPEMISG MTA MCVYSGL M
Sbjct: 1   MSTAVKAFLNSPVGPKTTHFWGPVANWGFVLAGLVDMNKPPEMISGNMTAAMCVYSGLFM 60

Query: 321 RFAWMVEPRNYLLLAC 368
           RFAWMV+PRNYLLLAC
Sbjct: 61  RFAWMVQPRNYLLLAC 76


>ref|XP_002462297.1| hypothetical protein SORBIDRAFT_02g023450 [Sorghum bicolor]
           gi|241925674|gb|EER98818.1| hypothetical protein
           SORBIDRAFT_02g023450 [Sorghum bicolor]
          Length = 107

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/76 (72%), Positives = 58/76 (76%)
 Frame = +3

Query: 141 MSPVFKAFLNSPVGPKTTHFWGPLXXXXXXXXXXXDMQKPPEMISGKMTAVMCVYSGLCM 320
           MS   KAF+NSPVGPKTTHFWGP+           DM KPPEMISG MTA MCVYSGL M
Sbjct: 1   MSTALKAFINSPVGPKTTHFWGPVANWGFVIAGLVDMNKPPEMISGNMTAAMCVYSGLFM 60

Query: 321 RFAWMVEPRNYLLLAC 368
           RFAWMV+PRNYLLLAC
Sbjct: 61  RFAWMVQPRNYLLLAC 76


>ref|XP_003574476.1| PREDICTED: brain protein 44-like protein-like [Brachypodium
           distachyon]
          Length = 107

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/76 (71%), Positives = 59/76 (77%)
 Frame = +3

Query: 141 MSPVFKAFLNSPVGPKTTHFWGPLXXXXXXXXXXXDMQKPPEMISGKMTAVMCVYSGLCM 320
           M+  FKAF+NSPVGPKTTHFWGP+           D+ KPPEMISG MTA MCVYSGL M
Sbjct: 1   MATAFKAFVNSPVGPKTTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTAAMCVYSGLFM 60

Query: 321 RFAWMVEPRNYLLLAC 368
           RFAWMV+PRNYLLLAC
Sbjct: 61  RFAWMVQPRNYLLLAC 76


>ref|XP_003530308.1| PREDICTED: brain protein 44-like protein-like [Glycine max]
          Length = 108

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/76 (72%), Positives = 60/76 (78%)
 Frame = +3

Query: 141 MSPVFKAFLNSPVGPKTTHFWGPLXXXXXXXXXXXDMQKPPEMISGKMTAVMCVYSGLCM 320
           M+  F+AFLNSPVGPKTTHFWGP+           DM+KPPEMISG MTAVMCVYS L M
Sbjct: 1   MASNFRAFLNSPVGPKTTHFWGPIANWGFVAAGLIDMKKPPEMISGNMTAVMCVYSALFM 60

Query: 321 RFAWMVEPRNYLLLAC 368
           RFAWMV+PRNYLLLAC
Sbjct: 61  RFAWMVQPRNYLLLAC 76


>ref|XP_002463699.1| hypothetical protein SORBIDRAFT_01g004480 [Sorghum bicolor]
           gi|241917553|gb|EER90697.1| hypothetical protein
           SORBIDRAFT_01g004480 [Sorghum bicolor]
          Length = 107

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/76 (71%), Positives = 58/76 (76%)
 Frame = +3

Query: 141 MSPVFKAFLNSPVGPKTTHFWGPLXXXXXXXXXXXDMQKPPEMISGKMTAVMCVYSGLCM 320
           M+   K+FLNSPVGPKTTHFWGP+           DM KPPEMISG MTA MCVYSGL M
Sbjct: 1   MATALKSFLNSPVGPKTTHFWGPVANWGFVIAGLVDMNKPPEMISGNMTAAMCVYSGLFM 60

Query: 321 RFAWMVEPRNYLLLAC 368
           RFAWMV+PRNYLLLAC
Sbjct: 61  RFAWMVQPRNYLLLAC 76


Top