BLASTX nr result
ID: Coptis25_contig00039282
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00039282 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCH50966.1| T4.5 [Malus x robusta] 63 3e-08 gb|ACN32036.1| unknown [Zea mays] 51 3e-07 emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 50 3e-07 gb|ACL54615.1| unknown [Zea mays] 50 6e-07 emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera] 40 2e-06 >emb|CCH50966.1| T4.5 [Malus x robusta] Length = 1670 Score = 62.8 bits (151), Expect = 3e-08 Identities = 28/53 (52%), Positives = 39/53 (73%) Frame = -3 Query: 272 WMKNDQMLMIWINSTLSEEILPYVIDLPTSRALWNALETRFATLS*SHVLQLK 114 W + DQ+LMIWINSTLS+++LP I + SR+LW +LE RF+ S +HV L+ Sbjct: 330 WCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSLR 382 >gb|ACN32036.1| unknown [Zea mays] Length = 376 Score = 50.8 bits (120), Expect(2) = 3e-07 Identities = 22/57 (38%), Positives = 37/57 (64%) Frame = -3 Query: 272 WMKNDQMLMIWINSTLSEEILPYVIDLPTSRALWNALETRFATLS*SHVLQLKKSAA 102 W DQ+++ INS+LSEE+L V+D T+R W+ LE +A+ S + ++Q++ A Sbjct: 88 WYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYASSSRARIMQIRMQLA 144 Score = 28.5 bits (62), Expect(2) = 3e-07 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 115 KSQLQDVKK*GSTMAEYLHKLKCITDALAASG 20 + QL ++K T AEY K+K + D LAA G Sbjct: 140 RMQLATIQKGDLTAAEYFRKVKRLADTLAAVG 171 >emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] Length = 1171 Score = 49.7 bits (117), Expect(2) = 3e-07 Identities = 22/54 (40%), Positives = 36/54 (66%) Frame = -3 Query: 272 WMKNDQMLMIWINSTLSEEILPYVIDLPTSRALWNALETRFATLS*SHVLQLKK 111 W K D L+ WI ++LSE+++ + L TS+ +W AL+TRF++ S S + LK+ Sbjct: 74 WQKKDVCLLGWILASLSEKLVSTIYGLETSKQVWTALQTRFSSQSRSRISHLKR 127 Score = 29.3 bits (64), Expect(2) = 3e-07 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -1 Query: 115 KSQLQDVKK*GSTMAEYLHKLKCITDALAASGAIVD 8 K QLQ + + + +EYL K + D LAA+G VD Sbjct: 126 KRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVD 161 >gb|ACL54615.1| unknown [Zea mays] Length = 376 Score = 49.7 bits (117), Expect(2) = 6e-07 Identities = 22/57 (38%), Positives = 36/57 (63%) Frame = -3 Query: 272 WMKNDQMLMIWINSTLSEEILPYVIDLPTSRALWNALETRFATLS*SHVLQLKKSAA 102 W DQ+++ INS+LSEE+L V+D T+R W+ LE +A+ S ++Q++ A Sbjct: 88 WYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYASSSRVRIMQIRMQLA 144 Score = 28.5 bits (62), Expect(2) = 6e-07 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 115 KSQLQDVKK*GSTMAEYLHKLKCITDALAASG 20 + QL ++K T AEY K+K + D LAA G Sbjct: 140 RMQLATIQKGDLTAAEYFRKVKRLADTLAAVG 171 >emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera] Length = 1138 Score = 40.4 bits (93), Expect(2) = 2e-06 Identities = 19/53 (35%), Positives = 30/53 (56%) Frame = -3 Query: 272 WMKNDQMLMIWINSTLSEEILPYVIDLPTSRALWNALETRFATLS*SHVLQLK 114 W ++DQ+L+ W+ S + E ILP ++ TS LW LE F + + + Q K Sbjct: 86 WEQHDQLLLSWLLSFVFESILPRLVGCDTSFLLWGRLEQYFVSQTRAKAKQFK 138 Score = 36.2 bits (82), Expect(2) = 2e-06 Identities = 18/32 (56%), Positives = 23/32 (71%) Frame = -1 Query: 115 KSQLQDVKK*GSTMAEYLHKLKCITDALAASG 20 K+QLQ KK GST+ EYL K+K D+LA+ G Sbjct: 138 KTQLQHTKKGGSTIDEYLVKIKVCVDSLASVG 169