BLASTX nr result

ID: Coptis25_contig00039282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039282
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 63   3e-08
gb|ACN32036.1| unknown [Zea mays]                                      51   3e-07
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    50   3e-07
gb|ACL54615.1| unknown [Zea mays]                                      50   6e-07
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]    40   2e-06

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = -3

Query: 272 WMKNDQMLMIWINSTLSEEILPYVIDLPTSRALWNALETRFATLS*SHVLQLK 114
           W + DQ+LMIWINSTLS+++LP  I +  SR+LW +LE RF+  S +HV  L+
Sbjct: 330 WCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSLR 382


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 50.8 bits (120), Expect(2) = 3e-07
 Identities = 22/57 (38%), Positives = 37/57 (64%)
 Frame = -3

Query: 272 WMKNDQMLMIWINSTLSEEILPYVIDLPTSRALWNALETRFATLS*SHVLQLKKSAA 102
           W   DQ+++  INS+LSEE+L  V+D  T+R  W+ LE  +A+ S + ++Q++   A
Sbjct: 88  WYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYASSSRARIMQIRMQLA 144



 Score = 28.5 bits (62), Expect(2) = 3e-07
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 115 KSQLQDVKK*GSTMAEYLHKLKCITDALAASG 20
           + QL  ++K   T AEY  K+K + D LAA G
Sbjct: 140 RMQLATIQKGDLTAAEYFRKVKRLADTLAAVG 171


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 49.7 bits (117), Expect(2) = 3e-07
 Identities = 22/54 (40%), Positives = 36/54 (66%)
 Frame = -3

Query: 272 WMKNDQMLMIWINSTLSEEILPYVIDLPTSRALWNALETRFATLS*SHVLQLKK 111
           W K D  L+ WI ++LSE+++  +  L TS+ +W AL+TRF++ S S +  LK+
Sbjct: 74  WQKKDVCLLGWILASLSEKLVSTIYGLETSKQVWTALQTRFSSQSRSRISHLKR 127



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 115 KSQLQDVKK*GSTMAEYLHKLKCITDALAASGAIVD 8
           K QLQ + +   + +EYL   K + D LAA+G  VD
Sbjct: 126 KRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVD 161


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score = 49.7 bits (117), Expect(2) = 6e-07
 Identities = 22/57 (38%), Positives = 36/57 (63%)
 Frame = -3

Query: 272 WMKNDQMLMIWINSTLSEEILPYVIDLPTSRALWNALETRFATLS*SHVLQLKKSAA 102
           W   DQ+++  INS+LSEE+L  V+D  T+R  W+ LE  +A+ S   ++Q++   A
Sbjct: 88  WYHQDQLVLSVINSSLSEEVLATVVDATTARGAWSTLERMYASSSRVRIMQIRMQLA 144



 Score = 28.5 bits (62), Expect(2) = 6e-07
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 115 KSQLQDVKK*GSTMAEYLHKLKCITDALAASG 20
           + QL  ++K   T AEY  K+K + D LAA G
Sbjct: 140 RMQLATIQKGDLTAAEYFRKVKRLADTLAAVG 171


>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
          Length = 1138

 Score = 40.4 bits (93), Expect(2) = 2e-06
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = -3

Query: 272 WMKNDQMLMIWINSTLSEEILPYVIDLPTSRALWNALETRFATLS*SHVLQLK 114
           W ++DQ+L+ W+ S + E ILP ++   TS  LW  LE  F + + +   Q K
Sbjct: 86  WEQHDQLLLSWLLSFVFESILPRLVGCDTSFLLWGRLEQYFVSQTRAKAKQFK 138



 Score = 36.2 bits (82), Expect(2) = 2e-06
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -1

Query: 115 KSQLQDVKK*GSTMAEYLHKLKCITDALAASG 20
           K+QLQ  KK GST+ EYL K+K   D+LA+ G
Sbjct: 138 KTQLQHTKKGGSTIDEYLVKIKVCVDSLASVG 169


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