BLASTX nr result

ID: Coptis25_contig00039268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039268
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]    61   2e-09
emb|CAN69820.1| hypothetical protein VITISV_025709 [Vitis vinifera]    60   4e-09
emb|CAN83213.1| hypothetical protein VITISV_010892 [Vitis vinifera]    57   4e-09
emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]    58   7e-09
emb|CAN74105.1| hypothetical protein VITISV_008953 [Vitis vinifera]    64   1e-08

>emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]
          Length = 2095

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 26/81 (32%), Positives = 39/81 (48%)
 Frame = -1

Query: 335  WALCWGRTLTSDNLRKRSKILVNRCIMCMKDEETIQHLFLDCEVAQVVWDYFMQSLKCQD 156
            W   WG+ LT + L++R   L NRC +C+ +EET+ HL L C   +V+W+          
Sbjct: 1948 WEAXWGKVLTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHCIKTRVLWNLLFSLF---- 2003

Query: 155  DLSQGIMGRFNCQPQVRFQGW 93
                GI    +C  +    GW
Sbjct: 2004 ----GISWTLSCSVKATLXGW 2020



 Score = 25.4 bits (54), Expect(2) = 2e-09
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 60   VTWSLWFERNRRTFDDQ 10
            + W++W ERNR  F D+
Sbjct: 2040 IFWTVWKERNRLAFGDE 2056


>emb|CAN69820.1| hypothetical protein VITISV_025709 [Vitis vinifera]
          Length = 779

 Score = 60.1 bits (144), Expect(2) = 4e-09
 Identities = 26/81 (32%), Positives = 39/81 (48%)
 Frame = -1

Query: 335 WALCWGRTLTSDNLRKRSKILVNRCIMCMKDEETIQHLFLDCEVAQVVWDYFMQSLKCQD 156
           W   WG+ LT + L++R   L NRC +C+ +EET+ HL L C   +V+W+          
Sbjct: 567 WEASWGKVLTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHCIKTRVLWNLLFSLF---- 622

Query: 155 DLSQGIMGRFNCQPQVRFQGW 93
               GI    +C  +    GW
Sbjct: 623 ----GISWTLSCSVKSTLLGW 639



 Score = 25.4 bits (54), Expect(2) = 4e-09
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 60  VTWSLWFERNRRTFDDQ 10
           + W++W ERNR  F D+
Sbjct: 659 IFWTVWKERNRLAFGDE 675


>emb|CAN83213.1| hypothetical protein VITISV_010892 [Vitis vinifera]
          Length = 472

 Score = 56.6 bits (135), Expect(2) = 4e-09
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = -1

Query: 335 WALCWGRTLTSDNLRKRSKILVNRCIMCMKDEETIQHLFLDCEVAQVVWD 186
           W   WGR LT D L+KR   L N C +C  +EET+ H+ + C V +V+WD
Sbjct: 103 WEATWGRVLTLDRLQKRGWQLPNCCFLCGCEEETVNHILIHCIVVRVLWD 152



 Score = 28.9 bits (63), Expect(2) = 4e-09
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -3

Query: 63  AVTWSLWFERNRRTFDDQSRD 1
           A+ W +W ERN R F+D++R+
Sbjct: 182 ALMWVVWRERNXRIFEDKARN 202


>emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]
          Length = 1636

 Score = 58.2 bits (139), Expect(2) = 7e-09
 Identities = 25/81 (30%), Positives = 38/81 (46%)
 Frame = -1

Query: 335  WALCWGRTLTSDNLRKRSKILVNRCIMCMKDEETIQHLFLDCEVAQVVWDYFMQSLKCQD 156
            W   WG+ LT + L++R   L NRC +C+ +EET+ HL L C   + +W+          
Sbjct: 1489 WEASWGKVLTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHCVKTRDLWNLLFSLF---- 1544

Query: 155  DLSQGIMGRFNCQPQVRFQGW 93
                GI    +C  +    GW
Sbjct: 1545 ----GISWTLSCTVKTTLLGW 1561



 Score = 26.6 bits (57), Expect(2) = 7e-09
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 60   VTWSLWFERNRRTFDDQ 10
            + WS+W ERNR  F D+
Sbjct: 1581 IFWSVWKERNRLAFGDE 1597


>emb|CAN74105.1| hypothetical protein VITISV_008953 [Vitis vinifera]
          Length = 1282

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 25/50 (50%), Positives = 33/50 (66%)
 Frame = -1

Query: 335  WALCWGRTLTSDNLRKRSKILVNRCIMCMKDEETIQHLFLDCEVAQVVWD 186
            W   WG+ LT D ++KR + L NRC MC++ EETI HL L C   +V+WD
Sbjct: 1186 WEATWGKALTLDIVQKRGRALANRCFMCLEKEETIDHLLLHCSKTRVLWD 1235


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