BLASTX nr result

ID: Coptis25_contig00039251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039251
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283321.1| PREDICTED: uncharacterized protein LOC100261...   244   8e-63
emb|CAN61437.1| hypothetical protein VITISV_033770 [Vitis vinife...   244   8e-63
ref|XP_002514192.1| conserved hypothetical protein [Ricinus comm...   243   3e-62
ref|XP_002308301.1| NAC domain protein, IPR003441 [Populus trich...   239   2e-61
ref|XP_002330524.1| NAC domain protein, IPR003441 [Populus trich...   235   5e-60

>ref|XP_002283321.1| PREDICTED: uncharacterized protein LOC100261063 [Vitis vinifera]
          Length = 450

 Score =  244 bits (624), Expect = 8e-63
 Identities = 112/123 (91%), Positives = 118/123 (95%)
 Frame = +1

Query: 274 MNKNQVGSFSSSNLIDAKLEEHQLCGSKQCPGCGHKLERKPDWLGLPAGVKFDPTDQELI 453
           MNK  +GS SSS+LIDAKLEEHQ+CGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 1   MNKTHLGSISSSDLIDAKLEEHQMCGSKQCPGCGHKLETKPDWLGLPAGVKFDPTDQELI 60

Query: 454 EHLEAKVEAQDAKSHPLIDEFIPTIEGEDGICYTHPERLPGVTRDGLSKHFFHRPSKAYT 633
           EHLEAKVEA+D KSHPLIDEFIPTIEGEDGICYTHPE+LPGVTRDGLS+HFFHRPSKAYT
Sbjct: 61  EHLEAKVEAKDMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYT 120

Query: 634 TGT 642
           TGT
Sbjct: 121 TGT 123


>emb|CAN61437.1| hypothetical protein VITISV_033770 [Vitis vinifera]
           gi|297738730|emb|CBI27975.3| unnamed protein product
           [Vitis vinifera]
          Length = 454

 Score =  244 bits (624), Expect = 8e-63
 Identities = 112/123 (91%), Positives = 118/123 (95%)
 Frame = +1

Query: 274 MNKNQVGSFSSSNLIDAKLEEHQLCGSKQCPGCGHKLERKPDWLGLPAGVKFDPTDQELI 453
           MNK  +GS SSS+LIDAKLEEHQ+CGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 1   MNKTHLGSISSSDLIDAKLEEHQMCGSKQCPGCGHKLETKPDWLGLPAGVKFDPTDQELI 60

Query: 454 EHLEAKVEAQDAKSHPLIDEFIPTIEGEDGICYTHPERLPGVTRDGLSKHFFHRPSKAYT 633
           EHLEAKVEA+D KSHPLIDEFIPTIEGEDGICYTHPE+LPGVTRDGLS+HFFHRPSKAYT
Sbjct: 61  EHLEAKVEAKDMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYT 120

Query: 634 TGT 642
           TGT
Sbjct: 121 TGT 123


>ref|XP_002514192.1| conserved hypothetical protein [Ricinus communis]
           gi|223546648|gb|EEF48146.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score =  243 bits (619), Expect = 3e-62
 Identities = 112/123 (91%), Positives = 118/123 (95%)
 Frame = +1

Query: 274 MNKNQVGSFSSSNLIDAKLEEHQLCGSKQCPGCGHKLERKPDWLGLPAGVKFDPTDQELI 453
           MNK+ +GS SSS+LIDAKLEEHQLCGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELI
Sbjct: 1   MNKSNLGSISSSDLIDAKLEEHQLCGSKQCPGCGHKLEGKPDWLGLPAGVKFDPTDQELI 60

Query: 454 EHLEAKVEAQDAKSHPLIDEFIPTIEGEDGICYTHPERLPGVTRDGLSKHFFHRPSKAYT 633
           EHLEAKV A+D KSHPLIDEFIPTIEGEDGICYTHPE+LPGVTRDGLS+HFFHRPSKAYT
Sbjct: 61  EHLEAKVVAKDMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYT 120

Query: 634 TGT 642
           TGT
Sbjct: 121 TGT 123


>ref|XP_002308301.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222854277|gb|EEE91824.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 455

 Score =  239 bits (611), Expect = 2e-61
 Identities = 110/121 (90%), Positives = 116/121 (95%)
 Frame = +1

Query: 280 KNQVGSFSSSNLIDAKLEEHQLCGSKQCPGCGHKLERKPDWLGLPAGVKFDPTDQELIEH 459
           K+ + S SSSNLIDAKLEEHQLCGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELIEH
Sbjct: 4   KSNMASISSSNLIDAKLEEHQLCGSKQCPGCGHKLEGKPDWLGLPAGVKFDPTDQELIEH 63

Query: 460 LEAKVEAQDAKSHPLIDEFIPTIEGEDGICYTHPERLPGVTRDGLSKHFFHRPSKAYTTG 639
           LEAKVEA+D +SHPLIDEFIPTIEGEDGICYTHPE+LPGVTRDGLS+HFFHRPSKAYTTG
Sbjct: 64  LEAKVEAKDMRSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTG 123

Query: 640 T 642
           T
Sbjct: 124 T 124


>ref|XP_002330524.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222872458|gb|EEF09589.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 452

 Score =  235 bits (600), Expect = 5e-60
 Identities = 108/118 (91%), Positives = 114/118 (96%)
 Frame = +1

Query: 289 VGSFSSSNLIDAKLEEHQLCGSKQCPGCGHKLERKPDWLGLPAGVKFDPTDQELIEHLEA 468
           + S SSS+LIDAKLEEHQLCGSKQCPGCGHKLE KPDWLGLPAGVKFDPTDQELIEHLEA
Sbjct: 7   MASISSSDLIDAKLEEHQLCGSKQCPGCGHKLEGKPDWLGLPAGVKFDPTDQELIEHLEA 66

Query: 469 KVEAQDAKSHPLIDEFIPTIEGEDGICYTHPERLPGVTRDGLSKHFFHRPSKAYTTGT 642
           KVEA+D +SHPLIDEFIPTIEGEDGICYTHPE+LPGVTRDGLS+HFFHRPSKAYTTGT
Sbjct: 67  KVEAKDMRSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGT 124


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