BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039244
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    68   9e-10
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    63   2e-08
emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]    60   1e-07
ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein A...    59   5e-07

>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/106 (33%), Positives = 57/106 (53%)
 Frame = +2

Query: 44  GWAAVIRDAKGGVVAASKGKSDYRVISMIELQGVEKGLELATRQGVKKIETRTDSTNVVS 223
           G+  + RD  G  + A   K+    I ++EL  + +GL LA+  G+K I   +DS +VV 
Sbjct: 177 GFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKAIWVESDSMSVVK 236

Query: 224 FMKETEQQPWQARKILTHIAQLVGQMEKFTIQHVYREANKLADALA 361
            +   +    +A   L HI  L+G+ EK+ + H +RE NK AD L+
Sbjct: 237 TINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRETNKAADFLS 282


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/109 (31%), Positives = 58/109 (53%)
 Frame = +2

Query: 44  GWAAVIRDAKGGVVAASKGKSDYRVISMIELQGVEKGLELATRQGVKKIETRTDSTNVVS 223
           G+  ++RD +G  + A   K+    I ++EL  + +GL LA   G+K I   +DS + V 
Sbjct: 296 GFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGLVLALGLGIKVIWVESDSMSAVK 355

Query: 224 FMKETEQQPWQARKILTHIAQLVGQMEKFTIQHVYREANKLADALANNV 370
            +   +    +A + L HI  L+ + E++ + H +RE NK AD L+  V
Sbjct: 356 TINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWRETNKAADYLSKMV 404


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/106 (32%), Positives = 55/106 (51%)
 Frame = +2

Query: 44  GWAAVIRDAKGGVVAASKGKSDYRVISMIELQGVEKGLELATRQGVKKIETRTDSTNVVS 223
           G+  + RD  G  + A   K+    I ++EL  + +GL LA+  G+K I   +DS + V 
Sbjct: 290 GFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKAIWVESDSMSAVK 349

Query: 224 FMKETEQQPWQARKILTHIAQLVGQMEKFTIQHVYREANKLADALA 361
            +   +    +A   L HI  L+ + EK+ + H +RE NK AD L+
Sbjct: 350 TINRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRETNKAADFLS 395


>emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]
          Length = 395

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = +2

Query: 29  SGELGGWAAVIRDAKGGVVAASKGKSDYRVISMIELQGVEKGLELATRQGVKKIETRTDS 208
           +G  GG   ++RDA+G  +AA     D     M E+  +E GL LA +  V++I    DS
Sbjct: 247 TGRAGG-GGLLRDAQGSFIAAFATPLDTSNSLMAEIGALEGGLRLALKLNVERILIEGDS 305

Query: 209 TNVVSFMKETEQQPWQARK-ILTHIAQLVGQMEKFTIQHVYREANKLADALAN 364
              +  +    +   +  K ++THI +L+   ++ T +H +REAN+ AD LAN
Sbjct: 306 KITIEMLSGKREXTXEEEKSLMTHIRELLQGFQEVTARHEFREANRPADHLAN 358


>ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus] gi|449488498|ref|XP_004158057.1| PREDICTED:
           putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 205

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
 Frame = +2

Query: 26  TSGELGGWAA----VIRDAKGGVVAASKGKSDYRVISMIELQGVEKGLELATRQGVKKIE 193
           + GE+G   A    V+RD K   +            SM EL+ + KGLEL    G K + 
Sbjct: 52  SKGEIGPGVASIGGVLRDHKAQFLLGYAESIGRAYSSMAELKALTKGLELVLENGWKDVW 111

Query: 194 TRTDSTNVVSFMKET-EQQPWQARKILTHIAQLVGQMEKFTIQHVYREANKLADALAN 364
              D+  +V  + E  E +  +AR  L HI  L+   +   + H+YRE NK+AD  A+
Sbjct: 112 VEGDAKGLVEILAENREVKCMEARSYLRHIKSLLLDFDNCKVSHIYREGNKVADRFAS 169