BLASTX nr result

ID: Coptis25_contig00039240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039240
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532328.1| Osmotic avoidance abnormal protein, putative...    83   2e-14
ref|XP_002309056.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_004137940.1| PREDICTED: kinesin-like protein KIF22-like [...    81   8e-14
ref|XP_003530204.1| PREDICTED: kinesin-like protein KIF22-like [...    79   4e-13
ref|XP_002270444.1| PREDICTED: kinesin-like protein KIF22-B [Vit...    77   1e-12

>ref|XP_002532328.1| Osmotic avoidance abnormal protein, putative [Ricinus communis]
           gi|223527971|gb|EEF30055.1| Osmotic avoidance abnormal
           protein, putative [Ricinus communis]
          Length = 644

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 54/110 (49%), Positives = 67/110 (60%), Gaps = 14/110 (12%)
 Frame = +2

Query: 2   METPSQNT----KTSKQHSLISKVRVIVRLRP-------SSTNPITN--ISLLKPSDQNL 142
           +ET S NT    KT    S ISKVRVIVR+RP       S    +T+  IS++   D   
Sbjct: 3   VETSSLNTPRSIKTCMDTSFISKVRVIVRVRPFLPQEIASKNGTLTSCCISVIDREDCES 62

Query: 143 RNEVIVHLQDQLTSRNECFELDSFFGQE-SSVSEIFEKEVTPLISWVFNG 289
             EV V LQD  TSR EC++LDSFFGQE +S+ +IFE+EV PLI  +F G
Sbjct: 63  EEEVTVRLQDPDTSRKECYQLDSFFGQEDNSICKIFEREVRPLIPGIFEG 112


>ref|XP_002309056.1| predicted protein [Populus trichocarpa] gi|222855032|gb|EEE92579.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 50/104 (48%), Positives = 66/104 (63%), Gaps = 9/104 (8%)
 Frame = +2

Query: 5   ETPSQNTKTSKQHSLISKVRVIVRLRP--------SSTNPITNISLLKPSDQNLRNEVIV 160
           +TP          S  SKVRVIVR+RP         + NP + IS+L P D + R+EV V
Sbjct: 1   KTPKSLQTKPMDPSCTSKVRVIVRVRPFLSHEIPAKNGNPTSCISVLDP-DPDSRDEVTV 59

Query: 161 HLQDQLTSRNECFELDSFFGQE-SSVSEIFEKEVTPLISWVFNG 289
           HLQD  TSR EC++LD+FFGQE +++  IFE+EV+PLI  +F G
Sbjct: 60  HLQDPDTSRKECYQLDAFFGQEDNNLRSIFEREVSPLIPGMFRG 103


>ref|XP_004137940.1| PREDICTED: kinesin-like protein KIF22-like [Cucumis sativus]
           gi|449483641|ref|XP_004156646.1| PREDICTED: kinesin-like
           protein KIF22-like [Cucumis sativus]
          Length = 622

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 10/96 (10%)
 Frame = +2

Query: 32  SKQHSLISKVRVIVRLRP---------SSTNPITNISLLKPSDQNLRNEVIVHLQDQLTS 184
           S  HS ISKVRV+ R+RP         S   P++ IS+L  + Q  + EV VHL+D  TS
Sbjct: 11  STNHSAISKVRVVARVRPFLPLEGSVKSYRVPVSCISVLDQA-QISQEEVTVHLKDPETS 69

Query: 185 RNECFELDSFFGQES-SVSEIFEKEVTPLISWVFNG 289
           RNEC++LDSF+GQE  +V +IF+KEV PLI  +F+G
Sbjct: 70  RNECYQLDSFYGQEDHTVRQIFDKEVNPLIPGLFHG 105


>ref|XP_003530204.1| PREDICTED: kinesin-like protein KIF22-like [Glycine max]
          Length = 642

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/88 (46%), Positives = 63/88 (71%), Gaps = 8/88 (9%)
 Frame = +2

Query: 50  ISKVRVIVRLRP-------SSTNPITNISLLKPSDQNLRNEVIVHLQDQLTSRNECFELD 208
           +SKVRVIVR+RP       +    ++ IS+L    ++ ++E+ V+L+D LTSRNEC++LD
Sbjct: 24  VSKVRVIVRVRPFLAHETSARNGDVSCISVLDQDSESPQDEIAVYLKDPLTSRNECYQLD 83

Query: 209 SFFGQE-SSVSEIFEKEVTPLISWVFNG 289
           SFFG E ++V +IF +EV+PLI  +F+G
Sbjct: 84  SFFGHEDNNVGQIFHREVSPLIPGMFSG 111


>ref|XP_002270444.1| PREDICTED: kinesin-like protein KIF22-B [Vitis vinifera]
           gi|297740374|emb|CBI30556.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 10/104 (9%)
 Frame = +2

Query: 8   TPSQNTKTSKQHSLISKVRVIVRLRP---------SSTNPITNISLLKPSDQNLRNEVIV 160
           TP +      Q + ISKVRVIVR+RP          + NPI+  S+L   D     EV+V
Sbjct: 7   TPKKANTMQLQSTSISKVRVIVRVRPFLPHEIAAAKNGNPISCASVLD-QDCESGEEVVV 65

Query: 161 HLQDQLTSRNECFELDSFFG-QESSVSEIFEKEVTPLISWVFNG 289
           HL DQ TSR EC++LDSF G  +++VS IF +EV+PLI  +F+G
Sbjct: 66  HLNDQETSRRECYKLDSFLGPHDNNVSLIFYREVSPLIPGIFHG 109


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