BLASTX nr result

ID: Coptis25_contig00039212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039212
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67759.1| hypothetical protein VITISV_002575 [Vitis vinifera]   194   5e-48
emb|CBI28689.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_002277881.1| PREDICTED: patatin group A-3 [Vitis vinifera]     194   8e-48
gb|AEK28691.1| patatin-like phospholipase [Populus tremula]           191   7e-47
ref|XP_002307585.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46

>emb|CAN67759.1| hypothetical protein VITISV_002575 [Vitis vinifera]
          Length = 385

 Score =  194 bits (494), Expect = 5e-48
 Identities = 93/105 (88%), Positives = 101/105 (96%)
 Frame = +2

Query: 2   LVPCYDLNSSAPFVFSRADATESLSYDFELWRVCRATSATPSLFKPFELSSSDGKTSCLA 181
           LVPC+DLNSSAPFVFSRADA+ES S+DFELW+VCRAT+ATPS+FKPF L+S DGKTSC A
Sbjct: 158 LVPCFDLNSSAPFVFSRADASESPSFDFELWKVCRATTATPSMFKPFALTSVDGKTSCSA 217

Query: 182 IDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSLT 316
           +DGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSLT
Sbjct: 218 VDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSLT 262


>emb|CBI28689.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/105 (87%), Positives = 101/105 (96%)
 Frame = +2

Query: 2   LVPCYDLNSSAPFVFSRADATESLSYDFELWRVCRATSATPSLFKPFELSSSDGKTSCLA 181
           LVPC+DLNS+APFVFSRADA+ES S+DFELW+VCRAT+ATPS+FKPF L+S DGKTSC A
Sbjct: 136 LVPCFDLNSAAPFVFSRADASESPSFDFELWKVCRATTATPSMFKPFSLTSVDGKTSCSA 195

Query: 182 IDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSLT 316
           +DGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSLT
Sbjct: 196 VDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSLT 240


>ref|XP_002277881.1| PREDICTED: patatin group A-3 [Vitis vinifera]
          Length = 385

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/105 (87%), Positives = 101/105 (96%)
 Frame = +2

Query: 2   LVPCYDLNSSAPFVFSRADATESLSYDFELWRVCRATSATPSLFKPFELSSSDGKTSCLA 181
           LVPC+DLNS+APFVFSRADA+ES S+DFELW+VCRAT+ATPS+FKPF L+S DGKTSC A
Sbjct: 158 LVPCFDLNSAAPFVFSRADASESPSFDFELWKVCRATTATPSMFKPFSLTSVDGKTSCSA 217

Query: 182 IDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSLT 316
           +DGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSLT
Sbjct: 218 VDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGSLT 262


>gb|AEK28691.1| patatin-like phospholipase [Populus tremula]
          Length = 205

 Score =  191 bits (484), Expect = 7e-47
 Identities = 92/103 (89%), Positives = 99/103 (96%)
 Frame = +2

Query: 2   LVPCYDLNSSAPFVFSRADATESLSYDFELWRVCRATSATPSLFKPFELSSSDGKTSCLA 181
           LVPC+DL SSAPFVFSRADATES S++FELW+VCRATSATPSLFKPF+L+S DGKTSC A
Sbjct: 6   LVPCFDLKSSAPFVFSRADATESPSFNFELWKVCRATSATPSLFKPFDLTSVDGKTSCSA 65

Query: 182 IDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGS 310
           IDGGLVMNNPTAAAVTHVLHNKRDFP+VNGVEDLLVLSLGNGS
Sbjct: 66  IDGGLVMNNPTAAAVTHVLHNKRDFPTVNGVEDLLVLSLGNGS 108


>ref|XP_002307585.1| predicted protein [Populus trichocarpa] gi|222857034|gb|EEE94581.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  190 bits (482), Expect = 1e-46
 Identities = 92/103 (89%), Positives = 98/103 (95%)
 Frame = +2

Query: 2   LVPCYDLNSSAPFVFSRADATESLSYDFELWRVCRATSATPSLFKPFELSSSDGKTSCLA 181
           LVPC+DL SSAPFVFSRADATES S++FELW+VCRATSATPSLFKPF L+S DGKTSC A
Sbjct: 158 LVPCFDLKSSAPFVFSRADATESPSFNFELWKVCRATSATPSLFKPFNLTSVDGKTSCSA 217

Query: 182 IDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGS 310
           IDGGLVMNNPTAAAVTHVLHNKRDFP+VNGVEDLLVLSLGNGS
Sbjct: 218 IDGGLVMNNPTAAAVTHVLHNKRDFPTVNGVEDLLVLSLGNGS 260


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