BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039191
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helica...   224   6e-57
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   223   2e-56
emb|CBI34887.3| unnamed protein product [Vitis vinifera]              223   2e-56
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...   223   2e-56
ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helica...   220   1e-55

>ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Cucumis
           sativus] gi|449483903|ref|XP_004156727.1| PREDICTED:
           probable ATP-dependent DNA helicase HFM1-like [Cucumis
           sativus]
          Length = 1189

 Score =  224 bits (571), Expect = 6e-57
 Identities = 109/129 (84%), Positives = 121/129 (93%)
 Frame = -1

Query: 388 DILMQHSRGKSALVFCSTRKGAQEAALRLSQTAMTFGHSNPFIKSKEQQERLKDALLSFS 209
           D+LMQ+SRGKSALVFCSTRKGAQEAA RLSQTAMTFG+SNPFIKSKEQ ERL++A LS S
Sbjct: 341 DVLMQYSRGKSALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCS 400

Query: 208 DKQMQSCIPLGVGYHNGGLCLKDRNLIEGLFLRGDLQILCTTNTLAHGINLPAHTVVIKS 29
           DKQMQS I  GVGYHNGGLCLKDRNLIE LFL+GD+Q++CTTNTLAHGINLPAHTV+IKS
Sbjct: 401 DKQMQSNILYGVGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKS 460

Query: 28  TQYYNKEKG 2
           TQ++NKEKG
Sbjct: 461 TQHFNKEKG 469


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  223 bits (567), Expect = 2e-56
 Identities = 109/129 (84%), Positives = 120/129 (93%)
 Frame = -1

Query: 388  DILMQHSRGKSALVFCSTRKGAQEAALRLSQTAMTFGHSNPFIKSKEQQERLKDALLSFS 209
            DILMQ+SRGKSALVFCSTRKGAQEAA R+SQ AM +GHSNPFI+SKEQ+ERL++A LS S
Sbjct: 1017 DILMQYSRGKSALVFCSTRKGAQEAAQRISQIAMNYGHSNPFIRSKEQEERLREASLSCS 1076

Query: 208  DKQMQSCIPLGVGYHNGGLCLKDRNLIEGLFLRGDLQILCTTNTLAHGINLPAHTVVIKS 29
            DKQMQS I  GVGYHNGGLC KDRNLIEGLFL+GD+QILCTTNTLAHGINLPAHTVVIKS
Sbjct: 1077 DKQMQSYILYGVGYHNGGLCPKDRNLIEGLFLKGDIQILCTTNTLAHGINLPAHTVVIKS 1136

Query: 28   TQYYNKEKG 2
            TQ++NKEKG
Sbjct: 1137 TQHFNKEKG 1145


>emb|CBI34887.3| unnamed protein product [Vitis vinifera]
          Length = 1270

 Score =  223 bits (567), Expect = 2e-56
 Identities = 109/129 (84%), Positives = 120/129 (93%)
 Frame = -1

Query: 388 DILMQHSRGKSALVFCSTRKGAQEAALRLSQTAMTFGHSNPFIKSKEQQERLKDALLSFS 209
           DILMQ+SRGKSALVFCSTRKGAQEAA R+SQ AM +GHSNPFI+SKEQ+ERL++A LS S
Sbjct: 269 DILMQYSRGKSALVFCSTRKGAQEAAQRISQIAMNYGHSNPFIRSKEQEERLREASLSCS 328

Query: 208 DKQMQSCIPLGVGYHNGGLCLKDRNLIEGLFLRGDLQILCTTNTLAHGINLPAHTVVIKS 29
           DKQMQS I  GVGYHNGGLC KDRNLIEGLFL+GD+QILCTTNTLAHGINLPAHTVVIKS
Sbjct: 329 DKQMQSYILYGVGYHNGGLCPKDRNLIEGLFLKGDIQILCTTNTLAHGINLPAHTVVIKS 388

Query: 28  TQYYNKEKG 2
           TQ++NKEKG
Sbjct: 389 TQHFNKEKG 397


>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score =  223 bits (567), Expect = 2e-56
 Identities = 109/129 (84%), Positives = 121/129 (93%)
 Frame = -1

Query: 388  DILMQHSRGKSALVFCSTRKGAQEAALRLSQTAMTFGHSNPFIKSKEQQERLKDALLSFS 209
            DILMQ+SRGKSALVFCSTRKGAQEAA RLSQTAMTFG+SNPFIK KEQQERL++A LS S
Sbjct: 1019 DILMQYSRGKSALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKDKEQQERLREASLSCS 1078

Query: 208  DKQMQSCIPLGVGYHNGGLCLKDRNLIEGLFLRGDLQILCTTNTLAHGINLPAHTVVIKS 29
            D+QMQS I  GVGYHNGGLCLKDR+L+E LFL+GD++ILCTTNTLAHGINLPAHTVVIKS
Sbjct: 1079 DRQMQSYIIYGVGYHNGGLCLKDRSLVESLFLKGDIKILCTTNTLAHGINLPAHTVVIKS 1138

Query: 28   TQYYNKEKG 2
            TQ++NKEKG
Sbjct: 1139 TQHFNKEKG 1147


>ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Glycine
           max]
          Length = 1195

 Score =  220 bits (560), Expect = 1e-55
 Identities = 106/129 (82%), Positives = 120/129 (93%)
 Frame = -1

Query: 388 DILMQHSRGKSALVFCSTRKGAQEAALRLSQTAMTFGHSNPFIKSKEQQERLKDALLSFS 209
           DILMQ+SRGKSALVFCSTRKGAQEAA RLSQ  MTFG SNPFIK++EQQ+RL++A LS S
Sbjct: 266 DILMQYSRGKSALVFCSTRKGAQEAAQRLSQIVMTFGQSNPFIKNREQQDRLREASLSCS 325

Query: 208 DKQMQSCIPLGVGYHNGGLCLKDRNLIEGLFLRGDLQILCTTNTLAHGINLPAHTVVIKS 29
           DKQMQS I  GVGYHNGGLCLKDR+++EGLFL+GD+Q+LCTTNTLAHGINLPAHTVVIKS
Sbjct: 326 DKQMQSYILYGVGYHNGGLCLKDRSIVEGLFLKGDIQVLCTTNTLAHGINLPAHTVVIKS 385

Query: 28  TQYYNKEKG 2
           TQ++NKEKG
Sbjct: 386 TQHFNKEKG 394