BLASTX nr result

ID: Coptis25_contig00039175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039175
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315323.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_002311994.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_002529601.1| Kinesin-II 85 kDa subunit, putative [Ricinus...    98   6e-19
ref|XP_002273191.2| PREDICTED: armadillo repeat-containing kines...    92   4e-17
emb|CBI31422.3| unnamed protein product [Vitis vinifera]               92   4e-17

>ref|XP_002315323.1| predicted protein [Populus trichocarpa] gi|222864363|gb|EEF01494.1|
           predicted protein [Populus trichocarpa]
          Length = 1067

 Score =  101 bits (252), Expect = 6e-20
 Identities = 51/79 (64%), Positives = 61/79 (77%)
 Frame = +1

Query: 115 VYIHKNSQGKAGSEPSSLARDTKIGVPVQNGVATILKSKLLIVDLAGSERIDKSGSEGHM 294
           VY+ ++   KA  E +S  +D K  +   NG+  + KSKLLIVDLAGSER+DKSGSEGH+
Sbjct: 312 VYVRRSINQKAEDETTSQEKDVKSNLSGGNGIPRVRKSKLLIVDLAGSERLDKSGSEGHL 371

Query: 295 LEEAKFINLSLTSLGKCIN 351
           LEEAKFINLSLTSLGKCIN
Sbjct: 372 LEEAKFINLSLTSLGKCIN 390



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +3

Query: 6   GSFTVEISYLQLYLESVQDLLLPEKNNIPIVEDPKTG 116
           GS  VE+SYLQLY+ES+QDLL PEK NIPI ED +TG
Sbjct: 227 GSDIVEVSYLQLYMESIQDLLAPEKINIPINEDARTG 263


>ref|XP_002311994.1| predicted protein [Populus trichocarpa] gi|222851814|gb|EEE89361.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/79 (63%), Positives = 62/79 (78%)
 Frame = +1

Query: 115 VYIHKNSQGKAGSEPSSLARDTKIGVPVQNGVATILKSKLLIVDLAGSERIDKSGSEGHM 294
           V++ ++   KAG E +S  +D K  +   NG+  + KSKLL+VDLAGSER+DKSGSEGH+
Sbjct: 247 VHVRRSINQKAGDETASQEKDVKSNLAGGNGLPRVRKSKLLVVDLAGSERLDKSGSEGHL 306

Query: 295 LEEAKFINLSLTSLGKCIN 351
           LEEAKFINLSLTSLGKCIN
Sbjct: 307 LEEAKFINLSLTSLGKCIN 325



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/38 (68%), Positives = 31/38 (81%)
 Frame = +3

Query: 3   PGSFTVEISYLQLYLESVQDLLLPEKNNIPIVEDPKTG 116
           PGS  VE+SYL LY+ES+QDLL PEK +IPI ED +TG
Sbjct: 161 PGSDVVEVSYLHLYMESIQDLLAPEKASIPINEDARTG 198


>ref|XP_002529601.1| Kinesin-II 85 kDa subunit, putative [Ricinus communis]
           gi|223530934|gb|EEF32793.1| Kinesin-II 85 kDa subunit,
           putative [Ricinus communis]
          Length = 1051

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/79 (63%), Positives = 61/79 (77%)
 Frame = +1

Query: 115 VYIHKNSQGKAGSEPSSLARDTKIGVPVQNGVATILKSKLLIVDLAGSERIDKSGSEGHM 294
           VY+ ++   K   E +S  +D+K  +P  NG+  + K KLLIVDLAGSER+DKSGSEGH+
Sbjct: 279 VYVRRSIHQKLEDETTS--QDSKSDLPSSNGIPRVRKGKLLIVDLAGSERLDKSGSEGHL 336

Query: 295 LEEAKFINLSLTSLGKCIN 351
           LEEAKFINLSLTSLGKCIN
Sbjct: 337 LEEAKFINLSLTSLGKCIN 355



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   PGSFTVEISYLQLYLESVQDLLLPEKNNIPIVEDPKTG 116
           P +  VE+SYLQLY+ES+QDLL PEK NIPI EDP+TG
Sbjct: 193 PDTDVVEMSYLQLYMESIQDLLAPEKINIPINEDPRTG 230


>ref|XP_002273191.2| PREDICTED: armadillo repeat-containing kinesin-like protein 1-like
           [Vitis vinifera]
          Length = 1017

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/79 (60%), Positives = 58/79 (73%)
 Frame = +1

Query: 115 VYIHKNSQGKAGSEPSSLARDTKIGVPVQNGVATILKSKLLIVDLAGSERIDKSGSEGHM 294
           VY+ ++   K   E SS  +  +  VP  + +  + KSKLLIVDLAGSER+DKSGSEG +
Sbjct: 266 VYVRRSVHKKVEDEISSQEKVNRSDVPGGSRIPIVRKSKLLIVDLAGSERVDKSGSEGQL 325

Query: 295 LEEAKFINLSLTSLGKCIN 351
           LEEAKFINLSLTSLGKCIN
Sbjct: 326 LEEAKFINLSLTSLGKCIN 344



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   PGSFTVEISYLQLYLESVQDLLLPEKNNIPIVEDPKTG 116
           P S +VEISY+QLY+ES+QDLL PEK NIPI EDP+TG
Sbjct: 180 PTSDSVEISYVQLYMESIQDLLAPEKINIPITEDPRTG 217


>emb|CBI31422.3| unnamed protein product [Vitis vinifera]
          Length = 1331

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/79 (60%), Positives = 58/79 (73%)
 Frame = +1

Query: 115 VYIHKNSQGKAGSEPSSLARDTKIGVPVQNGVATILKSKLLIVDLAGSERIDKSGSEGHM 294
           VY+ ++   K   E SS  +  +  VP  + +  + KSKLLIVDLAGSER+DKSGSEG +
Sbjct: 237 VYVRRSVHKKVEDEISSQEKVNRSDVPGGSRIPIVRKSKLLIVDLAGSERVDKSGSEGQL 296

Query: 295 LEEAKFINLSLTSLGKCIN 351
           LEEAKFINLSLTSLGKCIN
Sbjct: 297 LEEAKFINLSLTSLGKCIN 315



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +3

Query: 3   PGSFTVEISYLQLYLESVQDLLLPEKNNIPIVEDPKTG 116
           P S +VEISY+QLY+ES+QDLL PEK NIPI EDP+TG
Sbjct: 151 PTSDSVEISYVQLYMESIQDLLAPEKINIPITEDPRTG 188


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