BLASTX nr result

ID: Coptis25_contig00039102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039102
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538155.1| PREDICTED: long chain acyl-CoA synthetase 4-...    65   7e-09
ref|XP_003517504.1| PREDICTED: uncharacterized protein LOC100815...    65   7e-09
ref|XP_003517505.1| PREDICTED: uncharacterized protein LOC100815...    64   2e-08
emb|CBI34489.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002269278.1| PREDICTED: uncharacterized protein LOC100241...    61   1e-07

>ref|XP_003538155.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Glycine max]
          Length = 832

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = -2

Query: 198 RIKAYMDSRPSLRLETLA*RRTNFQGKQFPIXXXXXXXXXXAPLRNRPLNHNRMANWNKS 19
           +++ YM+SR SLR   LA RR+NFQG QFP           APL NR  N NR+ANWNK+
Sbjct: 58  KVQRYMESRSSLRQGALAKRRSNFQGNQFPAAVEVARKAVTAPLHNRVPNRNRVANWNKT 117

Query: 18  RY 13
           R+
Sbjct: 118 RF 119


>ref|XP_003517504.1| PREDICTED: uncharacterized protein LOC100815497 isoform 1 [Glycine
           max]
          Length = 202

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = -2

Query: 198 RIKAYMDSRPSLRLETLA*RRTNFQGKQFPIXXXXXXXXXXAPLRNRPLNHNRMANWNKS 19
           +++ YM+SR SLR   LA RR+NFQG QFP           APL NR  N NR+ANWNK+
Sbjct: 58  KVQRYMESRSSLRQGALAKRRSNFQGNQFPAAVEVARKAVTAPLHNRVPNRNRVANWNKT 117

Query: 18  RY 13
           R+
Sbjct: 118 RF 119


>ref|XP_003517505.1| PREDICTED: uncharacterized protein LOC100815497 isoform 2 [Glycine
           max] gi|255635708|gb|ACU18203.1| unknown [Glycine max]
          Length = 118

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/61 (52%), Positives = 39/61 (63%)
 Frame = -2

Query: 198 RIKAYMDSRPSLRLETLA*RRTNFQGKQFPIXXXXXXXXXXAPLRNRPLNHNRMANWNKS 19
           +++ YM+SR SLR   LA RR+NFQG QFP           APL NR  N NR+ANWNK+
Sbjct: 58  KVQRYMESRSSLRQGALAKRRSNFQGNQFPAAVEVARKAVTAPLHNRVPNRNRVANWNKT 117

Query: 18  R 16
           R
Sbjct: 118 R 118


>emb|CBI34489.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
 Frame = -2

Query: 198 RIKAYMDSRPSLRLETLA*RRTNFQGKQFPIXXXXXXXXXXAPLRNRPLNHNRMANWNKS 19
           +++ +MDSR SLR   LA RR+NFQ  QFP+           P+RNR  N NR+ NWN+ 
Sbjct: 77  KMRRFMDSRSSLRQGVLAQRRSNFQANQFPLANEVARKAAAVPIRNRAFNRNRVPNWNRP 136

Query: 18  R--YCK 7
              YCK
Sbjct: 137 SIYYCK 142


>ref|XP_002269278.1| PREDICTED: uncharacterized protein LOC100241044 [Vitis vinifera]
          Length = 211

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/61 (45%), Positives = 37/61 (60%)
 Frame = -2

Query: 198 RIKAYMDSRPSLRLETLA*RRTNFQGKQFPIXXXXXXXXXXAPLRNRPLNHNRMANWNKS 19
           +++ +MDSR SLR   LA RR+NFQ  QFP+           P+RNR  N NR+ NWN+ 
Sbjct: 59  KMRRFMDSRSSLRQGVLAQRRSNFQANQFPLANEVARKAAAVPIRNRAFNRNRVPNWNRP 118

Query: 18  R 16
           R
Sbjct: 119 R 119


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