BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039098
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165765.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   133   1e-29
ref|XP_004148378.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   133   1e-29
ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   128   4e-28
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   127   1e-27
ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric...   124   1e-26

>ref|XP_004165765.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           COP1-like [Cucumis sativus]
          Length = 384

 Score =  133 bits (335), Expect = 1e-29
 Identities = 60/96 (62%), Positives = 70/96 (72%)
 Frame = +2

Query: 2   YYICTPAKLSSLRWRPNTNGRVVGSGDYDGVVTEYDLERCMPIFERDEHGGRRVWSLDYX 181
           + ICTPAKLSSLRW+PN NGR++GSGDYDGVV EYDLE  +PIFERDEHGGRRVWS+DY 
Sbjct: 104 FCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYS 163

Query: 182 XXXXXXXXXXXXXXXMQMWDTRCVGNECVAMAQSSI 289
                          +Q+WDTRC   ECVA+ Q S+
Sbjct: 164 TVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSV 199


>ref|XP_004148378.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
          Length = 383

 Score =  133 bits (335), Expect = 1e-29
 Identities = 60/96 (62%), Positives = 70/96 (72%)
 Frame = +2

Query: 2   YYICTPAKLSSLRWRPNTNGRVVGSGDYDGVVTEYDLERCMPIFERDEHGGRRVWSLDYX 181
           + ICTPAKLSSLRW+PN NGR++GSGDYDGVV EYDLE  +PIFERDEHGGRRVWS+DY 
Sbjct: 104 FCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYS 163

Query: 182 XXXXXXXXXXXXXXXMQMWDTRCVGNECVAMAQSSI 289
                          +Q+WDTRC   ECVA+ Q S+
Sbjct: 164 TVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSV 199


>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 383

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/99 (59%), Positives = 71/99 (71%)
 Frame = +2

Query: 2   YYICTPAKLSSLRWRPNTNGRVVGSGDYDGVVTEYDLERCMPIFERDEHGGRRVWSLDYX 181
           YY+CTPAKLSSLRW+P + GRV+GSGDYDGVVTEYDL++ +PIFERDEHGGRR+WS+DY 
Sbjct: 111 YYVCTPAKLSSLRWKPGSAGRVLGSGDYDGVVTEYDLDQKIPIFERDEHGGRRIWSVDYS 170

Query: 182 XXXXXXXXXXXXXXXMQMWDTRCVGNECVAMAQSSISGN 298
                          MQMWD RC G + VA  + S  G+
Sbjct: 171 HWDPFVGASGSDDGTMQMWDPRCEGIKNVAKVRPSGGGS 209


>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 382

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/98 (60%), Positives = 69/98 (70%)
 Frame = +2

Query: 2   YYICTPAKLSSLRWRPNTNGRVVGSGDYDGVVTEYDLERCMPIFERDEHGGRRVWSLDYX 181
           YYI TPAKLSSLRW+P ++GRV+GSGDYDGVVTEYDL+R +PIFERDEHGGRR+WS+DY 
Sbjct: 111 YYIWTPAKLSSLRWKPGSSGRVLGSGDYDGVVTEYDLDRKIPIFERDEHGGRRIWSVDYS 170

Query: 182 XXXXXXXXXXXXXXXMQMWDTRCVGNECVAMAQSSISG 295
                          +QMWD RC G   VA  + S  G
Sbjct: 171 HWNPFVGASGSDDGTIQMWDPRCEGTTNVAKVRPSAGG 208


>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
           gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
           cop1, putative [Ricinus communis]
          Length = 426

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/99 (56%), Positives = 69/99 (69%)
 Frame = +2

Query: 2   YYICTPAKLSSLRWRPNTNGRVVGSGDYDGVVTEYDLERCMPIFERDEHGGRRVWSLDYX 181
           ++ICTPAKLSSLRW+P + GRV+GSGDYDGVV EYD+E  +PIFERDEHGGRR+WS+DY 
Sbjct: 153 FFICTPAKLSSLRWKPCSGGRVIGSGDYDGVVMEYDVETRIPIFERDEHGGRRIWSVDYS 212

Query: 182 XXXXXXXXXXXXXXXMQMWDTRCVGNECVAMAQSSISGN 298
                          MQMWD R  G  CVA  + S++ +
Sbjct: 213 HWSPVVGASGSDDGTMQMWDPRHEGGGCVATVKPSVTSS 251