BLASTX nr result

ID: Coptis25_contig00039072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039072
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566164.1| PREDICTED: uncharacterized protein LOC100827...    95   7e-18
dbj|BAD37986.1| ribosomal protein-like [Oryza sativa Japonica Gr...    92   4e-17
ref|XP_003567179.1| PREDICTED: uncharacterized protein LOC100844...    91   7e-17
ref|XP_003566378.1| PREDICTED: uncharacterized protein LOC100833...    90   2e-16
gb|AAF97981.1|AC000103_31 F21J9.3 [Arabidopsis thaliana]               89   4e-16

>ref|XP_003566164.1| PREDICTED: uncharacterized protein LOC100827873 [Brachypodium
           distachyon]
          Length = 423

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/62 (69%), Positives = 54/62 (87%)
 Frame = -1

Query: 250 QESYRKDVERAFGVLQSRFAIVRGKARLWDKDVLHDVMSACIILHNMIVEEERHNYLNAY 71
           QE++RKDVERAFGVLQ+RFAIVRG ARLWD++VLHD+++AC+I+HNMIVE+ER      Y
Sbjct: 311 QEAHRKDVERAFGVLQARFAIVRGPARLWDEEVLHDIITACVIMHNMIVEDERDEGPQDY 370

Query: 70  VY 65
            Y
Sbjct: 371 NY 372


>dbj|BAD37986.1| ribosomal protein-like [Oryza sativa Japonica Group]
          Length = 280

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/56 (75%), Positives = 50/56 (89%)
 Frame = -1

Query: 250 QESYRKDVERAFGVLQSRFAIVRGKARLWDKDVLHDVMSACIILHNMIVEEERHNY 83
           +E+ RKDVERAFGVLQS FAIVRG AR+WD+D LHD+M ACII+HNMIVE+ER +Y
Sbjct: 181 REACRKDVERAFGVLQSCFAIVRGAARMWDEDTLHDIMMACIIMHNMIVEDERDDY 236


>ref|XP_003567179.1| PREDICTED: uncharacterized protein LOC100844457 [Brachypodium
           distachyon]
          Length = 399

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/62 (66%), Positives = 52/62 (83%)
 Frame = -1

Query: 250 QESYRKDVERAFGVLQSRFAIVRGKARLWDKDVLHDVMSACIILHNMIVEEERHNYLNAY 71
           Q+++RKDVERAFGVLQ RFAIVRG  RLWD++VLHD+++AC+I+HNMIVE+ER      Y
Sbjct: 287 QKTHRKDVERAFGVLQDRFAIVRGPTRLWDQEVLHDIITACVIMHNMIVEDERDEGPQDY 346

Query: 70  VY 65
            Y
Sbjct: 347 NY 348


>ref|XP_003566378.1| PREDICTED: uncharacterized protein LOC100833375 [Brachypodium
           distachyon]
          Length = 357

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/62 (64%), Positives = 52/62 (83%)
 Frame = -1

Query: 250 QESYRKDVERAFGVLQSRFAIVRGKARLWDKDVLHDVMSACIILHNMIVEEERHNYLNAY 71
           +E++ KDVERAFGVLQ+RFAIVRG  RLWD++VLHD+++AC+I+HNMIVE+ER      Y
Sbjct: 245 EEAHSKDVERAFGVLQARFAIVRGPTRLWDQEVLHDIITACVIMHNMIVEDERDEGPQDY 304

Query: 70  VY 65
            Y
Sbjct: 305 NY 306


>gb|AAF97981.1|AC000103_31 F21J9.3 [Arabidopsis thaliana]
          Length = 457

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/53 (75%), Positives = 49/53 (92%)
 Frame = -1

Query: 250 QESYRKDVERAFGVLQSRFAIVRGKARLWDKDVLHDVMSACIILHNMIVEEER 92
           QE+ RKDVERAFGVLQSRFAIV G +RLW+K VLHD+M++CII+HNMI+E+ER
Sbjct: 237 QEACRKDVERAFGVLQSRFAIVAGPSRLWNKTVLHDIMTSCIIMHNMIIEDER 289


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