BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00039005
         (908 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi...   314   2e-83
tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea m...   283   3e-74
ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containi...   272   9e-71
gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japo...   269   6e-70
ref|NP_001060398.1| Os07g0636900 [Oryza sativa Japonica Group] g...   269   6e-70

>ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
            [Vitis vinifera]
          Length = 640

 Score =  314 bits (804), Expect = 2e-83
 Identities = 150/220 (68%), Positives = 182/220 (82%)
 Frame = -2

Query: 898  LREARELIRNMPFAPDAIVWRTFLSACKIHKNMELAEEATVNLLELEPHMDGNYVLLSNM 719
            L+EA ELI++MPFAPDAIVWR  L AC+I+KN+E+AEEATVNLLELEPH+DGNYVLLSN+
Sbjct: 421  LQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNI 480

Query: 718  YAQDKKWXXXXXXXXXXXDKNIHKIPGSSSIEVDNVVYEFIAGDRSHPKSKEIYEMLAEM 539
            Y+Q K+W           + NI K+PGSSSIEVDN V+EF+AGD+SHP+SK+I  ML+E+
Sbjct: 481  YSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEI 540

Query: 538  IDRLYIVGYKPLISSVLQDMNDKAKEHALAYHSEKLAFAFGLLSIAPGSPIRIVKNLRVC 359
              RL   GY PL +SVLQD ++K KE+ALA+HSEKLA AFGLLS APGS IRIVKNLRVC
Sbjct: 541  TARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVC 600

Query: 358  EDCHLAFKLLSVIYEREIIVRDRNRFHHFVGGSCTCRDFW 239
            +DCH+A KL+S  Y+R IIVRDRNRFHHFV GSC+C+D+W
Sbjct: 601  DDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640


>tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
          Length = 575

 Score =  283 bits (725), Expect = 3e-74
 Identities = 129/221 (58%), Positives = 168/221 (76%)
 Frame = -2

Query: 901  HLREARELIRNMPFAPDAIVWRTFLSACKIHKNMELAEEATVNLLELEPHMDGNYVLLSN 722
            H+ EA++LIR+MPF PDA++WR  L AC+I+KN+E+AEEA   L  L+PH DG+YVLLSN
Sbjct: 355  HIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSN 414

Query: 721  MYAQDKKWXXXXXXXXXXXDKNIHKIPGSSSIEVDNVVYEFIAGDRSHPKSKEIYEMLAE 542
            +YAQ   W            + I +IPG SSIE  N ++EFI+GDRSHP+SKEIY+ML E
Sbjct: 415  IYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGE 474

Query: 541  MIDRLYIVGYKPLISSVLQDMNDKAKEHALAYHSEKLAFAFGLLSIAPGSPIRIVKNLRV 362
            M+DRL   GYKP+   VLQD+++++KE ALA HSEKLA AFGLL+   GS +RI KNLR 
Sbjct: 475  MMDRLRQAGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLRITKNLRA 534

Query: 361  CEDCHLAFKLLSVIYEREIIVRDRNRFHHFVGGSCTCRDFW 239
            CEDCH A KL++++YER++I+RDRNRFHHF  G C+C+D+W
Sbjct: 535  CEDCHSAIKLIALLYERKLIIRDRNRFHHFSEGRCSCKDYW 575


>ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like
            [Brachypodium distachyon]
          Length = 585

 Score =  272 bits (695), Expect = 9e-71
 Identities = 127/221 (57%), Positives = 164/221 (74%)
 Frame = -2

Query: 901  HLREARELIRNMPFAPDAIVWRTFLSACKIHKNMELAEEATVNLLELEPHMDGNYVLLSN 722
            H+ EA ELIR+M F PD I+WRT L AC+IHKN+E+AEEA   L  L+P  DG+YVLLSN
Sbjct: 365  HVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSN 424

Query: 721  MYAQDKKWXXXXXXXXXXXDKNIHKIPGSSSIEVDNVVYEFIAGDRSHPKSKEIYEMLAE 542
            +YAQ   W            +NI ++PG SSIE +N V+EF++GDRSHP+ +EIY+ML E
Sbjct: 425  IYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEE 484

Query: 541  MIDRLYIVGYKPLISSVLQDMNDKAKEHALAYHSEKLAFAFGLLSIAPGSPIRIVKNLRV 362
            M+DRL   GY+P+ S VLQD+++++K+ ALA HSEKLA AFGLL     S +RI KNLR 
Sbjct: 485  MMDRLRQAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRA 544

Query: 361  CEDCHLAFKLLSVIYEREIIVRDRNRFHHFVGGSCTCRDFW 239
            CEDCH A KL+S+ Y+R++IVRDRNRFHHF  G C+C+D+W
Sbjct: 545  CEDCHSAIKLISLAYDRKLIVRDRNRFHHFSEGQCSCKDYW 585


>gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
          Length = 492

 Score =  269 bits (688), Expect = 6e-70
 Identities = 126/221 (57%), Positives = 161/221 (72%)
 Frame = -2

Query: 901 HLREARELIRNMPFAPDAIVWRTFLSACKIHKNMELAEEATVNLLELEPHMDGNYVLLSN 722
           H+ EAR+LIR+M F PD I+WR  L AC+IHKN+E+AEEA   L  L+P  DG+YVLLSN
Sbjct: 272 HVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSN 331

Query: 721 MYAQDKKWXXXXXXXXXXXDKNIHKIPGSSSIEVDNVVYEFIAGDRSHPKSKEIYEMLAE 542
           +YAQ   W             NI +IPG SSIE D  ++EF++GDR HP+SKEIY +L E
Sbjct: 332 IYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEE 391

Query: 541 MIDRLYIVGYKPLISSVLQDMNDKAKEHALAYHSEKLAFAFGLLSIAPGSPIRIVKNLRV 362
           M+DRL   GYKP+   VLQD+++++KE +LA HSEKLA AF LL+    S IRI KNLR 
Sbjct: 392 MMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRA 451

Query: 361 CEDCHLAFKLLSVIYEREIIVRDRNRFHHFVGGSCTCRDFW 239
           CEDCH A KL+S++Y+R++IVRDRNRFHHF  G C+C+D+W
Sbjct: 452 CEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492


>ref|NP_001060398.1| Os07g0636900 [Oryza sativa Japonica Group]
           gi|113611934|dbj|BAF22312.1| Os07g0636900, partial
           [Oryza sativa Japonica Group]
          Length = 352

 Score =  269 bits (688), Expect = 6e-70
 Identities = 126/221 (57%), Positives = 161/221 (72%)
 Frame = -2

Query: 901 HLREARELIRNMPFAPDAIVWRTFLSACKIHKNMELAEEATVNLLELEPHMDGNYVLLSN 722
           H+ EAR+LIR+M F PD I+WR  L AC+IHKN+E+AEEA   L  L+P  DG+YVLLSN
Sbjct: 132 HVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSN 191

Query: 721 MYAQDKKWXXXXXXXXXXXDKNIHKIPGSSSIEVDNVVYEFIAGDRSHPKSKEIYEMLAE 542
           +YAQ   W             NI +IPG SSIE D  ++EF++GDR HP+SKEIY +L E
Sbjct: 192 IYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEE 251

Query: 541 MIDRLYIVGYKPLISSVLQDMNDKAKEHALAYHSEKLAFAFGLLSIAPGSPIRIVKNLRV 362
           M+DRL   GYKP+   VLQD+++++KE +LA HSEKLA AF LL+    S IRI KNLR 
Sbjct: 252 MMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRA 311

Query: 361 CEDCHLAFKLLSVIYEREIIVRDRNRFHHFVGGSCTCRDFW 239
           CEDCH A KL+S++Y+R++IVRDRNRFHHF  G C+C+D+W
Sbjct: 312 CEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 352