BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038959
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...    89   5e-16
gb|EAZ08016.1| hypothetical protein OsI_30282 [Oryza sativa Indi...    89   5e-16
ref|XP_002449843.1| hypothetical protein SORBIDRAFT_05g024303 [S...    85   7e-15
ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [S...    84   2e-14
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    81   1e-13

>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/98 (41%), Positives = 65/98 (66%)
 Frame = +2

Query: 8   LCRSKGEGGLGFRKSREMNQALISKHGRKLMKDEHSKWVQLFKATYPVWEDMVDIKTLPG 187
           LCR K +GG+G+R     N A++++ G +L+ +  S   Q+ +A Y    D++ ++  PG
Sbjct: 300 LCRRKEQGGIGYRDLHLFNLAMLARQGWRLIMEPMSLCAQVLRAKYFPTGDLMAVREKPG 359

Query: 188 DVSYFFRGIVRTLKLIKKGFLWRVGDGSNISIFQDPWL 301
            +SY +R IVR ++ +KKG +WRVGDG+NI I+ DPWL
Sbjct: 360 -ISYSWRSIVRGIQALKKGLIWRVGDGTNIDIWHDPWL 396


>gb|EAZ08016.1| hypothetical protein OsI_30282 [Oryza sativa Indica Group]
          Length = 632

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/98 (41%), Positives = 65/98 (66%)
 Frame = +2

Query: 8   LCRSKGEGGLGFRKSREMNQALISKHGRKLMKDEHSKWVQLFKATYPVWEDMVDIKTLPG 187
           LCR K +GG+G+R     N A++++ G +L+ +  S   Q+ +A Y    D++ ++  PG
Sbjct: 243 LCRRKEQGGIGYRDLHLFNLAMLARQGWRLIMEPMSLCAQVLRAKYFPTGDLMAVREKPG 302

Query: 188 DVSYFFRGIVRTLKLIKKGFLWRVGDGSNISIFQDPWL 301
            +SY +R IVR ++ +KKG +WRVGDG+NI I+ DPWL
Sbjct: 303 -ISYSWRSIVRGIQALKKGLIWRVGDGTNIDIWHDPWL 339


>ref|XP_002449843.1| hypothetical protein SORBIDRAFT_05g024303 [Sorghum bicolor]
           gi|241935686|gb|EES08831.1| hypothetical protein
           SORBIDRAFT_05g024303 [Sorghum bicolor]
          Length = 191

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/100 (38%), Positives = 65/100 (65%)
 Frame = +2

Query: 2   DKLCRSKGEGGLGFRKSREMNQALISKHGRKLMKDEHSKWVQLFKATYPVWEDMVDIKTL 181
           +++CR K EGGLG+R     N A++++ G +++++  S   QL +A Y     ++     
Sbjct: 58  EEMCRRKEEGGLGYRDLHLFNLAMLARQGWRILQNPDSLCAQLLRAKYGTNGSLLQTSEG 117

Query: 182 PGDVSYFFRGIVRTLKLIKKGFLWRVGDGSNISIFQDPWL 301
           PG +SY +R IVR L+ ++KG +WR+GDG  I+I++DPW+
Sbjct: 118 PG-ISYTWRSIVRGLQALQKGLIWRIGDGMQINIWEDPWI 156


>ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [Sorghum bicolor]
           gi|241931893|gb|EES05038.1| hypothetical protein
           SORBIDRAFT_04g017846 [Sorghum bicolor]
          Length = 397

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/100 (41%), Positives = 64/100 (64%)
 Frame = +2

Query: 2   DKLCRSKGEGGLGFRKSREMNQALISKHGRKLMKDEHSKWVQLFKATYPVWEDMVDIKTL 181
           ++L + K EGGLGFR     N A+++K G +L+K+  S   ++ KA Y     ++D +  
Sbjct: 152 EQLLKPKEEGGLGFRDIHSFNMAMLAKQGWRLLKEPESLCARVLKAKYHPNGSVLDAQPR 211

Query: 182 PGDVSYFFRGIVRTLKLIKKGFLWRVGDGSNISIFQDPWL 301
            G +SY +R I+  L+++KKG +WRVGDG+ I I+ DPWL
Sbjct: 212 RG-MSYSWRSILLGLEVVKKGMIWRVGDGAGIHIWSDPWL 250


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/98 (40%), Positives = 58/98 (59%)
 Frame = +2

Query: 8    LCRSKGEGGLGFRKSREMNQALISKHGRKLMKDEHSKWVQLFKATYPVWEDMVDIKTLPG 187
            LC SK +GGLGFR     NQAL+ K G +LM    S   ++ KA Y  W+D ++ + L  
Sbjct: 1131 LCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAE-LGS 1189

Query: 188  DVSYFFRGIVRTLKLIKKGFLWRVGDGSNISIFQDPWL 301
              SY +R  +   +L++KG  WR+GDG  + +F DPW+
Sbjct: 1190 SPSYLWRSFLWGRELLRKGVRWRIGDGKEVRVFIDPWV 1227