BLASTX nr result

ID: Coptis25_contig00038953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038953
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252...   102   4e-20
emb|CBI23013.3| unnamed protein product [Vitis vinifera]              102   4e-20
emb|CAN73471.1| hypothetical protein VITISV_039356 [Vitis vinifera]   102   4e-20
ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago ...    83   3e-14
ref|XP_002318429.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14

>ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252197 [Vitis vinifera]
          Length = 1887

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/70 (67%), Positives = 57/70 (81%)
 Frame = -1

Query: 211  PYTGRVESIDPQRKLALPDPVLPTEKKIPPGFLGYAVNMIDLDDHYLYMRTTKGHGLRET 32
            PY G  +  DPQRKL +P+P+LPT + +PPGFLGYAVNM+DL+ H+L  RTT GHGLRET
Sbjct: 1692 PYIGGFQDNDPQRKLNIPNPILPTGE-MPPGFLGYAVNMVDLESHHLLTRTTAGHGLRET 1750

Query: 31   LFYLLFGKLQ 2
            LFY LFG+LQ
Sbjct: 1751 LFYCLFGELQ 1760


>emb|CBI23013.3| unnamed protein product [Vitis vinifera]
          Length = 1718

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/70 (67%), Positives = 57/70 (81%)
 Frame = -1

Query: 211  PYTGRVESIDPQRKLALPDPVLPTEKKIPPGFLGYAVNMIDLDDHYLYMRTTKGHGLRET 32
            PY G  +  DPQRKL +P+P+LPT + +PPGFLGYAVNM+DL+ H+L  RTT GHGLRET
Sbjct: 1523 PYIGGFQDNDPQRKLNIPNPILPTGE-MPPGFLGYAVNMVDLESHHLLTRTTAGHGLRET 1581

Query: 31   LFYLLFGKLQ 2
            LFY LFG+LQ
Sbjct: 1582 LFYCLFGELQ 1591


>emb|CAN73471.1| hypothetical protein VITISV_039356 [Vitis vinifera]
          Length = 1117

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/70 (67%), Positives = 57/70 (81%)
 Frame = -1

Query: 211 PYTGRVESIDPQRKLALPDPVLPTEKKIPPGFLGYAVNMIDLDDHYLYMRTTKGHGLRET 32
           PY G  +  DPQRKL +P+P+LPT + +PPGFLGYAVNM+DL+ H+L  RTT GHGLRET
Sbjct: 563 PYIGGFQDNDPQRKLNIPNPILPTGE-MPPGFLGYAVNMVDLESHHLLTRTTAGHGLRET 621

Query: 31  LFYLLFGKLQ 2
           LFY LFG+LQ
Sbjct: 622 LFYCLFGELQ 631


>ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago truncatula]
            gi|355477563|gb|AES58766.1| hypothetical protein
            MTR_1g008050 [Medicago truncatula]
          Length = 1675

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/69 (59%), Positives = 49/69 (71%)
 Frame = -1

Query: 211  PYTGRVESIDPQRKLALPDPVLPTEKKIPPGFLGYAVNMIDLDDHYLYMRTTKGHGLRET 32
            PY G ++  DPQ KLALP+P L   +  P GF+GYAVNMIDLD H+L  RT  GHGLRET
Sbjct: 1448 PYKGYLQEHDPQMKLALPNPKLHNGRT-PAGFIGYAVNMIDLDSHHLQTRTALGHGLRET 1506

Query: 31   LFYLLFGKL 5
            + + LF KL
Sbjct: 1507 VLFSLFKKL 1515


>ref|XP_002318429.1| predicted protein [Populus trichocarpa] gi|222859102|gb|EEE96649.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/70 (57%), Positives = 49/70 (70%)
 Frame = -1

Query: 211 PYTGRVESIDPQRKLALPDPVLPTEKKIPPGFLGYAVNMIDLDDHYLYMRTTKGHGLRET 32
           PYTG +E  DPQRKL L DP L     +P GF+GYA NMI++D   + + T  G+GLRET
Sbjct: 33  PYTGELECGDPQRKLKLQDPTLQCGN-VPSGFIGYAANMINIDTRDMNISTASGYGLRET 91

Query: 31  LFYLLFGKLQ 2
           LFY LFG+LQ
Sbjct: 92  LFYRLFGELQ 101


Top