BLASTX nr result

ID: Coptis25_contig00038920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038920
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001753386.1| predicted protein [Physcomitrella patens sub...   104   1e-20
ref|XP_002516115.1| conserved hypothetical protein [Ricinus comm...    95   8e-18
dbj|BAK61852.1| hypothetical protein [Citrus unshiu]                   89   3e-16
ref|XP_002308532.1| predicted protein [Populus trichocarpa] gi|2...    89   6e-16
gb|EAZ20046.1| hypothetical protein OsJ_35645 [Oryza sativa Japo...    84   1e-14

>ref|XP_001753386.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162695265|gb|EDQ81609.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 539

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/103 (49%), Positives = 71/103 (68%)
 Frame = -3

Query: 399 PRSRLAAQRERTGRLKMSDIVKYFDLPIQVASQRLGICPTALKKICRNNRVERWPQRKIQ 220
           P+S  AAQRERTG+LKM+D+ ++F LPI  A++ LGICPT LKKICR N + RWP RKI+
Sbjct: 434 PKSNAAAQRERTGKLKMTDLAQHFHLPINAAAKELGICPTVLKKICRRNGMRRWPHRKIK 493

Query: 219 KLNRQILDLEKSLRTKNGRLHETAKAKIERLKLERDRLFNGTL 91
            + R I  LE+++    G+  E+ + +I  L+ ER +L  G L
Sbjct: 494 SIERIIATLEQTIAEGAGQGDESIRMEIAMLRNERAQLCAGFL 536


>ref|XP_002516115.1| conserved hypothetical protein [Ricinus communis]
           gi|223544601|gb|EEF46117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 309

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 44/102 (43%), Positives = 66/102 (64%)
 Frame = -3

Query: 423 GESSYVRLPRSRLAAQRERTGRLKMSDIVKYFDLPIQVASQRLGICPTALKKICRNNRVE 244
           G +   R+ ++ LA QRERTG+L + D   YFDLPI+ A++R+ +CPT +KKICR   + 
Sbjct: 198 GGNDAERVMKTALAQQRERTGKLTLKDFTAYFDLPIEEAAKRMSLCPTVVKKICRRYGMN 257

Query: 243 RWPQRKIQKLNRQILDLEKSLRTKNGRLHETAKAKIERLKLE 118
           RWP RKI+ + RQ+  +   +R+ N      A A+I+RL+ E
Sbjct: 258 RWPHRKIKSMRRQMAKIRHFVRSNNSEEKARALAEIQRLQQE 299


>dbj|BAK61852.1| hypothetical protein [Citrus unshiu]
          Length = 354

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/101 (41%), Positives = 67/101 (66%)
 Frame = -3

Query: 420 ESSYVRLPRSRLAAQRERTGRLKMSDIVKYFDLPIQVASQRLGICPTALKKICRNNRVER 241
           E+   R  R+ L+AQRERTG+L + D++ YF LPI+ A++R+ +CPT +KKICR + + R
Sbjct: 244 ENEAERTTRTSLSAQRERTGKLTLRDLMIYFHLPIEEAARRMKLCPTVVKKICRRDGLHR 303

Query: 240 WPQRKIQKLNRQILDLEKSLRTKNGRLHETAKAKIERLKLE 118
           WP RKI+ + R++      LR+ +      A+ +I+RL+ E
Sbjct: 304 WPHRKIKSIQRRMSVASGRLRSNDAEERANAQIEIQRLQEE 344


>ref|XP_002308532.1| predicted protein [Populus trichocarpa] gi|222854508|gb|EEE92055.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 43/89 (48%), Positives = 59/89 (66%)
 Frame = -3

Query: 435 SHLIGESSYVRLPRSRLAAQRERTGRLKMSDIVKYFDLPIQVASQRLGICPTALKKICRN 256
           +H  GE    R  RS LA QRER GRL + D  +YF LPI+ A++RL +CPT +KKICR 
Sbjct: 279 NHGEGEIETERTTRSNLALQRERAGRLTLDDFRQYFHLPIEDAARRLHLCPTVVKKICRK 338

Query: 255 NRVERWPQRKIQKLNRQILDLEKSLRTKN 169
             + RWP RKI+ ++RQ+ DL+  L + +
Sbjct: 339 FGMTRWPHRKIKSIHRQLTDLQVLLNSND 367


>gb|EAZ20046.1| hypothetical protein OsJ_35645 [Oryza sativa Japonica Group]
          Length = 420

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/100 (47%), Positives = 65/100 (65%)
 Frame = -3

Query: 396 RSRLAAQRERTGRLKMSDIVKYFDLPIQVASQRLGICPTALKKICRNNRVERWPQRKIQK 217
           RS LA QRE+T +L++SDI  YF+LPI  A+++L IC TALK ICR + V RWP RK++ 
Sbjct: 324 RSALAIQREKTKQLQLSDIAPYFELPIAKAAKKLDICATALKGICRKHGVLRWPYRKVRS 383

Query: 216 LNRQILDLEKSLRTKNGRLHETAKAKIERLKLERDRLFNG 97
           ++RQI  L    R+ NG   +  + +IE L   R R+  G
Sbjct: 384 IDRQIATLR---RSGNG---DATRNEIETLIASRRRIVAG 417


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