BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038879
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21323.3| unnamed protein product [Vitis vinifera]              155   3e-36
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   155   3e-36
ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_002512901.1| pentatricopeptide repeat-containing protein,...   138   5e-31

>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/120 (60%), Positives = 97/120 (80%)
 Frame = -2

Query: 360 LALGFFNWASQQPNFSHCSLTYQSILKSLSISRQFNEVEKLIKDIKTHNVLLHPSIYRAV 181
           LALGFF WASQ+P F+H S++YQS+LKSLSISRQFN VE+L+KD+K   ++L  S+YR+V
Sbjct: 65  LALGFFYWASQKPGFAHTSISYQSVLKSLSISRQFNAVERLLKDVKAQKIVLDSSVYRSV 124

Query: 180 IASQIVGKKARNAFVIFNDIGSFGDEIGHEVCNSLLAALASDGYVDFAKTMFDEMFVRGI 1
           IAS I+GK+ +NAF+IFN++ +   EIG + CNSL+AALASDG V +A+ +FDEM   G+
Sbjct: 125 IASHIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVAALASDGCVVYAQRVFDEMIHHGV 184


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/120 (60%), Positives = 97/120 (80%)
 Frame = -2

Query: 360 LALGFFNWASQQPNFSHCSLTYQSILKSLSISRQFNEVEKLIKDIKTHNVLLHPSIYRAV 181
           LALGFF WASQ+P F+H S++YQS+LKSLSISRQFN VE+L+KD+K   ++L  S+YR+V
Sbjct: 65  LALGFFYWASQKPGFAHTSISYQSVLKSLSISRQFNAVERLLKDVKAQKIVLDSSVYRSV 124

Query: 180 IASQIVGKKARNAFVIFNDIGSFGDEIGHEVCNSLLAALASDGYVDFAKTMFDEMFVRGI 1
           IAS I+GK+ +NAF+IFN++ +   EIG + CNSL+AALASDG V +A+ +FDEM   G+
Sbjct: 125 IASHIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVAALASDGCVVYAQRVFDEMIHHGV 184


>ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 640

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/120 (56%), Positives = 89/120 (74%)
 Frame = -2

Query: 360 LALGFFNWASQQPNFSHCSLTYQSILKSLSISRQFNEVEKLIKDIKTHNVLLHPSIYRAV 181
           LALGFFNWASQQP F+H S +Y SILKSLS+SR F  +  L+K +KT  + L  S+YRAV
Sbjct: 65  LALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPIHSLLKQVKTQKIGLDLSVYRAV 124

Query: 180 IASQIVGKKARNAFVIFNDIGSFGDEIGHEVCNSLLAALASDGYVDFAKTMFDEMFVRGI 1
           I S I+ KK  +AF++FN++ S    IG E+CNSLLAALASDG+ + A+ +FDEM ++ I
Sbjct: 125 IDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAALASDGFFEHAQKVFDEMSLKSI 184


>ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 635

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/120 (56%), Positives = 89/120 (74%)
 Frame = -2

Query: 360 LALGFFNWASQQPNFSHCSLTYQSILKSLSISRQFNEVEKLIKDIKTHNVLLHPSIYRAV 181
           LALGFFNWASQQP F+H S +Y SILKSLS+SR F  +  L+K +KT  + L  S+YRAV
Sbjct: 65  LALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPIHSLLKQVKTQKIGLDLSVYRAV 124

Query: 180 IASQIVGKKARNAFVIFNDIGSFGDEIGHEVCNSLLAALASDGYVDFAKTMFDEMFVRGI 1
           I S I+ KK  +AF++FN++ S    IG E+CNSLLAALASDG+ + A+ +FDEM ++ I
Sbjct: 125 IDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAALASDGFFEHAQKVFDEMSLKSI 184


>ref|XP_002512901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547912|gb|EEF49404.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 655

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/120 (56%), Positives = 89/120 (74%)
 Frame = -2

Query: 360 LALGFFNWASQQPNFSHCSLTYQSILKSLSISRQFNEVEKLIKDIKTHNVLLHPSIYRAV 181
           LALGFFNWASQQP F+H SLTY SILKSLS+SRQFN +E ++K +K  N+ L  S  R V
Sbjct: 67  LALGFFNWASQQPGFTHNSLTYDSILKSLSLSRQFNAIEYVLKQVKNQNLTLDSSTQRFV 126

Query: 180 IASQIVGKKARNAFVIFNDIGSFGDEIGHEVCNSLLAALASDGYVDFAKTMFDEMFVRGI 1
           I+S I G+K ++A+++F++  S   +IG E+CNSLLA L SDGY D    +FDEM +RG+
Sbjct: 127 ISSLIRGRKTQDAYLVFSEAKSRTLDIGPEICNSLLAVLGSDGYFDKGLKVFDEMLLRGV 186