BLASTX nr result

ID: Coptis25_contig00038856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038856
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320932.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783...   100   2e-19
ref|NP_001189765.1| uncharacterized protein [Arabidopsis thalian...   100   2e-19
ref|NP_850466.2| uncharacterized protein [Arabidopsis thaliana] ...   100   2e-19
ref|XP_002301556.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_002320932.1| predicted protein [Populus trichocarpa] gi|222861705|gb|EEE99247.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/134 (40%), Positives = 84/134 (62%)
 Frame = -3

Query: 406 EISPSIIRQNKRFCQDGLGPTSPSQKGILESSELEQPSNQNNDDGMMSAVSLIAKALQSF 227
           E S  ++   KRFC         + KGI+E+    + S QN  D +   + L   AL++F
Sbjct: 606 EKSKFMLHPTKRFC---------NHKGIVETELTPEISEQNQGDELERVILLFVMALENF 656

Query: 226 KTRIQTQTSKKSCQILASLAEEIQLQLQNVNSQIQREVLKFTNLGNSKRKSLETRFEEQH 47
           + +++ +T KKS  IL S++E++ LQLQN+ SQIQ ++ K +++  SKRK LE+RFEEQ 
Sbjct: 657 RKKMKLETGKKSSDILVSVSEKMHLQLQNIESQIQTDLGKLSSVSKSKRKRLESRFEEQQ 716

Query: 46  ERLKSTQDKFKEEV 5
           E+LK   DKFK+++
Sbjct: 717 EQLKLIHDKFKQDI 730


>ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
          Length = 852

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/109 (47%), Positives = 80/109 (73%)
 Frame = -3

Query: 331 KGILESSELEQPSNQNNDDGMMSAVSLIAKALQSFKTRIQTQTSKKSCQILASLAEEIQL 152
           +G  +S  +++ S QN D G + AV L+A  L   ++++++ TS+KS +IL S+AEEI L
Sbjct: 561 EGTGDSDWIDEASEQNQD-GFVRAVELLALELGKLQSKLKSMTSQKSSEILKSVAEEIHL 619

Query: 151 QLQNVNSQIQREVLKFTNLGNSKRKSLETRFEEQHERLKSTQDKFKEEV 5
           QLQNV++QIQ ++ K T+LG SKRK +ETRFE+Q ++L+   ++FKEEV
Sbjct: 620 QLQNVHTQIQTDMGKLTSLGKSKRKRMETRFEDQQKQLRLIYNRFKEEV 668


>ref|NP_001189765.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330255688|gb|AEC10782.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 790

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/139 (38%), Positives = 89/139 (64%), Gaps = 5/139 (3%)
 Frame = -3

Query: 403 ISPSIIRQNKRFCQDG---LGPTSPSQKGILESSELEQPS--NQNNDDGMMSAVSLIAKA 239
           + PS +++N      G   L P SP  KGI ++   +  S  +++ D+G+  AV+L A A
Sbjct: 577 LGPSSVKRNSNLKGIGRVVLSPPSPLSKGIDKTDSFQHCSEMDEDEDEGLGRAVALFAMA 636

Query: 238 LQSFKTRIQTQTSKKSCQILASLAEEIQLQLQNVNSQIQREVLKFTNLGNSKRKSLETRF 59
           LQ+F+ ++++   KKS +I+AS++EEI L+L+N+ S I  E  K +NL  +KRK  ETR 
Sbjct: 637 LQNFERKLKSAAEKKSSEIIASVSEEIHLELENIKSHIITEAGKTSNLAKTKRKHAETRL 696

Query: 58  EEQHERLKSTQDKFKEEVA 2
           +EQ E+++   +KFK++V+
Sbjct: 697 QEQEEKMRMIHEKFKDDVS 715


>ref|NP_850466.2| uncharacterized protein [Arabidopsis thaliana]
           gi|110736851|dbj|BAF00383.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255687|gb|AEC10781.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 793

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/139 (38%), Positives = 89/139 (64%), Gaps = 5/139 (3%)
 Frame = -3

Query: 403 ISPSIIRQNKRFCQDG---LGPTSPSQKGILESSELEQPS--NQNNDDGMMSAVSLIAKA 239
           + PS +++N      G   L P SP  KGI ++   +  S  +++ D+G+  AV+L A A
Sbjct: 577 LGPSSVKRNSNLKGIGRVVLSPPSPLSKGIDKTDSFQHCSEMDEDEDEGLGRAVALFAMA 636

Query: 238 LQSFKTRIQTQTSKKSCQILASLAEEIQLQLQNVNSQIQREVLKFTNLGNSKRKSLETRF 59
           LQ+F+ ++++   KKS +I+AS++EEI L+L+N+ S I  E  K +NL  +KRK  ETR 
Sbjct: 637 LQNFERKLKSAAEKKSSEIIASVSEEIHLELENIKSHIITEAGKTSNLAKTKRKHAETRL 696

Query: 58  EEQHERLKSTQDKFKEEVA 2
           +EQ E+++   +KFK++V+
Sbjct: 697 QEQEEKMRMIHEKFKDDVS 715


>ref|XP_002301556.1| predicted protein [Populus trichocarpa] gi|222843282|gb|EEE80829.1|
            predicted protein [Populus trichocarpa]
          Length = 849

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 12/127 (9%)
 Frame = -3

Query: 349  PTSPSQKG------------ILESSELEQPSNQNNDDGMMSAVSLIAKALQSFKTRIQTQ 206
            PTSPS  G            I+E+    + S QN  + +  A+ L A AL++FK +++ +
Sbjct: 693  PTSPSPTGTSYNIVTLSAPCIVETELTPEISEQNQGNELERAIMLFATALENFKKKMKLE 752

Query: 205  TSKKSCQILASLAEEIQLQLQNVNSQIQREVLKFTNLGNSKRKSLETRFEEQHERLKSTQ 26
            T KKS  IL S++EEI+LQL+N+ SQIQ ++ K +++  SKR+ LE+RFEEQ E LK   
Sbjct: 753  TRKKSSDILMSVSEEIRLQLKNIESQIQTDLGKLSSVSKSKRRRLESRFEEQQEELKLIH 812

Query: 25   DKFKEEV 5
            DKFK+++
Sbjct: 813  DKFKQDI 819


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