BLASTX nr result

ID: Coptis25_contig00038854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038854
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263615.2| PREDICTED: LOW QUALITY PROTEIN: probable pec...   135   3e-30
emb|CBI23207.3| unnamed protein product [Vitis vinifera]              135   3e-30
emb|CAN60346.1| hypothetical protein VITISV_001795 [Vitis vinifera]   135   3e-30
ref|XP_003547262.1| PREDICTED: probable pectate lyase 16-like [G...   129   2e-28
ref|XP_002317128.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28

>ref|XP_002263615.2| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 16 [Vitis
           vinifera]
          Length = 397

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/82 (76%), Positives = 69/82 (84%)
 Frame = -2

Query: 250 DDPINPKPGTLRYGVIQTQPLWIIFARDMVIKLQNELIMNSFKTIDGRGVNVEIAYGPCI 71
           DDP+NPKPGTLRYGVIQT+PLWI+FA+DMVI L+NELIMNSFKTIDGRG  VEIAYGPCI
Sbjct: 97  DDPVNPKPGTLRYGVIQTKPLWIVFAKDMVITLKNELIMNSFKTIDGRGAKVEIAYGPCI 156

Query: 70  TVQGVXXXXXXXXXXHDCKPGK 5
           T+QGV          HDCKPGK
Sbjct: 157 TIQGVSHVIIHGISIHDCKPGK 178


>emb|CBI23207.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/82 (76%), Positives = 69/82 (84%)
 Frame = -2

Query: 250 DDPINPKPGTLRYGVIQTQPLWIIFARDMVIKLQNELIMNSFKTIDGRGVNVEIAYGPCI 71
           DDP+NPKPGTLRYGVIQT+PLWI+FA+DMVI L+NELIMNSFKTIDGRG  VEIAYGPCI
Sbjct: 48  DDPVNPKPGTLRYGVIQTKPLWIVFAKDMVITLKNELIMNSFKTIDGRGAKVEIAYGPCI 107

Query: 70  TVQGVXXXXXXXXXXHDCKPGK 5
           T+QGV          HDCKPGK
Sbjct: 108 TIQGVSHVIIHGISIHDCKPGK 129


>emb|CAN60346.1| hypothetical protein VITISV_001795 [Vitis vinifera]
          Length = 397

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/82 (76%), Positives = 69/82 (84%)
 Frame = -2

Query: 250 DDPINPKPGTLRYGVIQTQPLWIIFARDMVIKLQNELIMNSFKTIDGRGVNVEIAYGPCI 71
           DDP+NPKPGTLRYGVIQT+PLWI+FA+DMVI L+NELIMNSFKTIDGRG  VEIAYGPCI
Sbjct: 97  DDPVNPKPGTLRYGVIQTKPLWIVFAKDMVITLKNELIMNSFKTIDGRGAKVEIAYGPCI 156

Query: 70  TVQGVXXXXXXXXXXHDCKPGK 5
           T+QGV          HDCKPGK
Sbjct: 157 TIQGVSHVIIHGISIHDCKPGK 178


>ref|XP_003547262.1| PREDICTED: probable pectate lyase 16-like [Glycine max]
          Length = 373

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/82 (75%), Positives = 67/82 (81%)
 Frame = -2

Query: 250 DDPINPKPGTLRYGVIQTQPLWIIFARDMVIKLQNELIMNSFKTIDGRGVNVEIAYGPCI 71
           DDPI+PKPGTLRYGVIQTQPLWIIFA+DMVI+L NELIMNS+KTIDGRG  VEIA GPCI
Sbjct: 73  DDPISPKPGTLRYGVIQTQPLWIIFAKDMVIRLDNELIMNSYKTIDGRGAKVEIANGPCI 132

Query: 70  TVQGVXXXXXXXXXXHDCKPGK 5
           T+QGV          HDCKP K
Sbjct: 133 TIQGVSHVIIHGISIHDCKPSK 154


>ref|XP_002317128.1| predicted protein [Populus trichocarpa] gi|222860193|gb|EEE97740.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = -2

Query: 250 DDPINPKPGTLRYGVIQTQPLWIIFARDMVIKLQNELIMNSFKTIDGRGVNVEIAYGPCI 71
           DDP+NPKPG LRYG IQ++PLWI+FA+DMVI L+NELIMNS+KTIDGRG  VEIAYGPCI
Sbjct: 93  DDPVNPKPGMLRYGAIQSKPLWIVFAKDMVITLRNELIMNSYKTIDGRGAKVEIAYGPCI 152

Query: 70  TVQGVXXXXXXXXXXHDCKPGK 5
           T+QGV          HDCKPGK
Sbjct: 153 TIQGVSHVIIHGISIHDCKPGK 174


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