BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038839
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|2...    39   2e-06
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                      50   8e-06
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                      50   8e-06
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]    55   8e-06
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                      49   1e-05

>ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|222839595|gb|EEE77932.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
 Frame = -2

Query: 428 LPTFSIPTIANLVIVIKMNDDNFLLWSRQIEVFLIGWDLY*FVDG-----SYKCLTA--- 273
           + T S     N+    K+ + N+L W +QI+ +L G  L+ +VDG     S   LT    
Sbjct: 1   MATISSALSQNIAQFTKLTETNYLTWLQQIKPYLHGAKLWGYVDGTIPEPSLTILTTDTQ 60

Query: 272 -----TNSGYTVWLHTDMNLLSILSVTIT 201
                 N  +  W   D  ++SIL+ T+T
Sbjct: 61  STRSIPNPDHASWFIIDQQIVSILTTTLT 89



 Score = 37.4 bits (85), Expect(2) = 2e-06
 Identities = 21/56 (37%), Positives = 33/56 (58%)
 Frame = -3

Query: 178 GCQNSAAI*SRLQK*FSHKYVANSSQIRRNLNENSHGTHSFSEYLQ*AKTYTDALL 11
           G   S AI   L++ FS K VA+++ ++  L + + GT S   YL+ AK+  DAL+
Sbjct: 98  GFDTSKAIWDCLERHFSQKSVASATNLKMQLLDLNKGTQSVDTYLRHAKSIADALI 153


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 49.7 bits (117), Expect(2) = 8e-06
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
 Frame = -2

Query: 398 NLVIVIKMNDDNFLLWSRQIEVFLIGWDLY*FVDGSYKCLT----------ATNSGYTVW 249
           N+  V ++ D NF++WSRQ+   L G+DL  +VDGS    T           TN+ YT+W
Sbjct: 25  NMTNVTRLTDSNFVMWSRQVHALLDGYDLAGYVDGSIPIPTPTRTTADGVVTTNNDYTLW 84

Query: 248 LHTDMNLLSIL 216
              D  + S L
Sbjct: 85  KRQDKLIYSAL 95



 Score = 24.6 bits (52), Expect(2) = 8e-06
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -3

Query: 166 SAAI*SRLQK*FSHKYVANSSQIRRNLNENSHGTHSFSEYLQ*AKTYTDALLI 8
           SA I   L   F++   A+  Q+R+ L + + GT S   Y Q   T  D L +
Sbjct: 113 SAEIWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSIVTYFQGFTTRFDHLAL 165


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 49.7 bits (117), Expect(2) = 8e-06
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
 Frame = -2

Query: 398 NLVIVIKMNDDNFLLWSRQIEVFLIGWDLY*FVDGSYKCLT----------ATNSGYTVW 249
           N+  V ++ D NF++WSRQ+   L G+DL  +VDGS    T           TN+ YT+W
Sbjct: 25  NMTNVTRLTDSNFVMWSRQVHALLDGYDLAGYVDGSIPIPTPTRTTADGVVTTNNDYTLW 84

Query: 248 LHTDMNLLSIL 216
              D  + S L
Sbjct: 85  KRQDKLIYSAL 95



 Score = 24.6 bits (52), Expect(2) = 8e-06
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -3

Query: 166 SAAI*SRLQK*FSHKYVANSSQIRRNLNENSHGTHSFSEYLQ*AKTYTDALLI 8
           SA I   L   F++   A+  Q+R+ L + + GT S   Y Q   T  D L +
Sbjct: 113 SAEIWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSIVTYFQGFTTRFDHLAL 165


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
 Frame = -2

Query: 425 PTFSIPTIANLVIVIKMNDDNFLLWSRQIEVFLIGWDLY*FVDGSYKC----LTAT---- 270
           PT  + T+ ++ + IK+   N+LLW  Q    L   +L+ ++DGS       +TA+    
Sbjct: 180 PTLPLNTMVHM-LTIKLTSSNYLLWRNQFVPLLTSQELFSYLDGSITAPSPMITASDGTP 238

Query: 269 --NSGYTVWLHTDMNLLSILSVTITTYSLIDYWLSEFRCYLVSSSKVVFS*ICCQL--FT 102
             N  YT WLHTD  LLS+L  ++T  S+ +  + EF           F  +C QL    
Sbjct: 239 KSNPAYTSWLHTDQTLLSLLYSSLTEESMSES-IVEF--------SSTFKGLCDQLAAIG 289

Query: 101 DP*ESQRELSWYSFFLG 51
            P +   ++ WY   LG
Sbjct: 290 RPIDDTDKVHWYLCALG 306


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 49.3 bits (116), Expect(2) = 1e-05
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
 Frame = -2

Query: 398 NLVIVIKMNDDNFLLWSRQIEVFLIGWDLY*FVDGSYKCLT----------ATNSGYTVW 249
           N+  V ++ D NF++WSRQ+   L G+DL  ++DGS    T           TN+ YT+W
Sbjct: 25  NMTNVTRLTDSNFVMWSRQVHALLDGYDLAGYIDGSIPIPTPTRTTADGVVTTNNDYTLW 84

Query: 248 LHTDMNLLSIL 216
              D  + S L
Sbjct: 85  KRQDKLIYSAL 95



 Score = 24.6 bits (52), Expect(2) = 1e-05
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -3

Query: 166 SAAI*SRLQK*FSHKYVANSSQIRRNLNENSHGTHSFSEYLQ*AKTYTDALLI 8
           SA I   L   F++   A+  Q+R+ L + + GT S   Y Q   T  D L +
Sbjct: 113 SAEIWETLSSTFANPSWAHVQQLRQQLKQWTKGTKSIVTYFQGFTTRFDHLAL 165