BLASTX nr result
ID: Coptis25_contig00038833
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00038833
(425 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83561.1| hypothetical protein VITISV_024106 [Vitis vinifera] 115 1e-30
emb|CAN74004.1| hypothetical protein VITISV_006235 [Vitis vinifera] 114 3e-30
emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera] 115 4e-30
emb|CAN80093.1| hypothetical protein VITISV_010721 [Vitis vinifera] 115 5e-30
emb|CAN78803.1| hypothetical protein VITISV_032700 [Vitis vinifera] 114 6e-30
>emb|CAN83561.1| hypothetical protein VITISV_024106 [Vitis vinifera]
Length = 1750
Score = 115 bits (288), Expect(3) = 1e-30
Identities = 54/90 (60%), Positives = 68/90 (75%)
Frame = +1
Query: 1 YDHVSWRFLDYVLGRMGFGGKWRR*VWKCISSVSFSVLVNGSPAGFFKSSRGIRQGDPLS 180
YDHV W FLD+VL + GF +WR+ + C+SSVSF++LVNGS G+ K+SRG+RQGDPLS
Sbjct: 1188 YDHVKWDFLDHVLEKKGFSPRWRKWMSGCLSSVSFAILVNGSAKGWVKASRGLRQGDPLS 1247
Query: 181 LLLFILVVEVFGRMISRANSRGILEGFRVG 270
LF LV +V RM+ RA R +LEGFRVG
Sbjct: 1248 PFLFTLVADVLSRMLMRAEERNMLEGFRVG 1277
Score = 35.4 bits (80), Expect(3) = 1e-30
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 276 RVRISHLQFADDTLIFLRAEVGQVRWLRGILRQF 377
R R+SHLQFADDT+ F + +++ L+ +L F
Sbjct: 1280 RTRVSHLQFADDTIFFSNSREEELQTLKSLLLVF 1313
Score = 27.3 bits (59), Expect(3) = 1e-30
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 365 FETVSGLRVNLAKSKMYGV 421
F +SGL+VNL KS +YG+
Sbjct: 1313 FGHISGLKVNLNKSSIYGI 1331
>emb|CAN74004.1| hypothetical protein VITISV_006235 [Vitis vinifera]
Length = 1768
Score = 114 bits (285), Expect(3) = 3e-30
Identities = 53/90 (58%), Positives = 68/90 (75%)
Frame = +1
Query: 1 YDHVSWRFLDYVLGRMGFGGKWRR*VWKCISSVSFSVLVNGSPAGFFKSSRGIRQGDPLS 180
YDHV W FLD+VL + GF +WR+ + C+SSVSF++LVNGS G+ K+SRG+RQGDPLS
Sbjct: 1162 YDHVKWDFLDHVLEKKGFSPRWRKWMSGCLSSVSFAILVNGSAKGWVKASRGLRQGDPLS 1221
Query: 181 LLLFILVVEVFGRMISRANSRGILEGFRVG 270
LF LV +V +M+ RA R +LEGFRVG
Sbjct: 1222 PFLFTLVADVLSKMLMRAEERNMLEGFRVG 1251
Score = 35.4 bits (80), Expect(3) = 3e-30
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 276 RVRISHLQFADDTLIFLRAEVGQVRWLRGILRQF 377
R R+SHLQFADDT+ F + +++ L+ +L F
Sbjct: 1254 RTRVSHLQFADDTIFFSNSREEELQTLKSLLLVF 1287
Score = 27.3 bits (59), Expect(3) = 3e-30
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 365 FETVSGLRVNLAKSKMYGV 421
F +SGL+VNL KS +YG+
Sbjct: 1287 FGHISGLKVNLNKSSIYGI 1305
>emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]
Length = 1532
Score = 115 bits (287), Expect(3) = 4e-30
Identities = 52/90 (57%), Positives = 68/90 (75%)
Frame = +1
Query: 1 YDHVSWRFLDYVLGRMGFGGKWRR*VWKCISSVSFSVLVNGSPAGFFKSSRGIRQGDPLS 180
YDHVSW FLD+V+ + GF KWR+ + C+SSVSF++LVNG+ G+ K+SRG+RQGDPLS
Sbjct: 1042 YDHVSWDFLDHVMEKKGFNPKWRKWIRGCLSSVSFAILVNGNAKGWVKASRGLRQGDPLS 1101
Query: 181 LLLFILVVEVFGRMISRANSRGILEGFRVG 270
LF +V +V RM+ RA R + EGFRVG
Sbjct: 1102 PFLFTIVADVLSRMLLRAEERNVFEGFRVG 1131
Score = 33.1 bits (74), Expect(3) = 4e-30
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 276 RVRISHLQFADDTLIFLRAEVGQVRWLRGILRQF 377
R R+SHLQFADDT+ F + L+ +L F
Sbjct: 1134 RTRVSHLQFADDTIFFXSTREEDLLTLKSVLVVF 1167
Score = 28.5 bits (62), Expect(3) = 4e-30
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 350 VVEGHFETVSGLRVNLAKSKMYGV 421
VV GH +SGL+VNL KS +YG+
Sbjct: 1165 VVFGH---ISGLKVNLDKSNIYGI 1185
>emb|CAN80093.1| hypothetical protein VITISV_010721 [Vitis vinifera]
Length = 1031
Score = 115 bits (287), Expect(3) = 5e-30
Identities = 54/90 (60%), Positives = 69/90 (76%)
Frame = +1
Query: 1 YDHVSWRFLDYVLGRMGFGGKWRR*VWKCISSVSFSVLVNGSPAGFFKSSRGIRQGDPLS 180
YDHVSW FLD+VL GFG +WR+ + C+SSVSF+VLVNG+ G+ K+SRG+RQGDPLS
Sbjct: 485 YDHVSWDFLDHVLEMKGFGLRWRKWMRGCLSSVSFAVLVNGNAKGWVKASRGLRQGDPLS 544
Query: 181 LLLFILVVEVFGRMISRANSRGILEGFRVG 270
LF +V +V RM+ +A R +LEGFRVG
Sbjct: 545 PFLFTIVADVLSRMLLKAEERNVLEGFRVG 574
Score = 33.9 bits (76), Expect(3) = 5e-30
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 276 RVRISHLQFADDTLIFLRAEVGQVRWLRGILRQF 377
R R+SHLQFADDT+ F + + L+ +L F
Sbjct: 577 RTRVSHLQFADDTIFFSSSREEDMMTLKNVLLVF 610
Score = 27.3 bits (59), Expect(3) = 5e-30
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 365 FETVSGLRVNLAKSKMYGV 421
F +SGL+VNL KS +YG+
Sbjct: 610 FGHISGLKVNLDKSNIYGI 628
>emb|CAN78803.1| hypothetical protein VITISV_032700 [Vitis vinifera]
Length = 1469
Score = 114 bits (285), Expect(3) = 6e-30
Identities = 53/90 (58%), Positives = 68/90 (75%)
Frame = +1
Query: 1 YDHVSWRFLDYVLGRMGFGGKWRR*VWKCISSVSFSVLVNGSPAGFFKSSRGIRQGDPLS 180
YDHV W FLD+VL + GF +WR+ + C+SSVS+++LVNGS G+ K+SRG+RQGDPLS
Sbjct: 411 YDHVKWDFLDHVLEKKGFSPRWRKWMSGCLSSVSYAILVNGSAKGWVKASRGLRQGDPLS 470
Query: 181 LLLFILVVEVFGRMISRANSRGILEGFRVG 270
LF LV +V RMI RA R ++EGFRVG
Sbjct: 471 PFLFTLVADVLSRMIMRAEERNMMEGFRVG 500
Score = 34.3 bits (77), Expect(3) = 6e-30
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 RVRISHLQFADDTLIFLRAEVGQVRWLRGILRQF 377
R R+SHLQFADDT+ F + ++ L+ +L F
Sbjct: 503 RTRVSHLQFADDTIFFSNSREEXLQTLKSLLLVF 536
Score = 27.3 bits (59), Expect(3) = 6e-30
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 365 FETVSGLRVNLAKSKMYGV 421
F +SGL+VNL KS +YG+
Sbjct: 536 FGHISGLKVNLNKSSIYGI 554