BLASTX nr result

ID: Coptis25_contig00038815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038815
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]   219   2e-55
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   216   2e-54
ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, parti...   213   1e-53
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ...   212   3e-53
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   209   2e-52

>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score =  219 bits (558), Expect = 2e-55
 Identities = 103/125 (82%), Positives = 116/125 (92%)
 Frame = -2

Query: 375 LIQPSHSPFASPILLVKKKDGSWRFCVDYRKLNDITIKDKFPIPVIDELLDELHGAKVFS 196
           LI+PS+SPF+SPILLVKK DG+WRFCVDYR LNDITIKDK+PIPVIDELLDELHGAK +S
Sbjct: 590 LIRPSNSPFSSPILLVKKADGAWRFCVDYRALNDITIKDKYPIPVIDELLDELHGAKFYS 649

Query: 195 KIDLRSSYHQIRVTEADIYKTAFRTHHGHYEFKVMPFGLTNAPATFQALMNEVFQPYLRK 16
           K+DLRS YHQIRV EADI KTAFRTH GHYEF VMPFGLTNAP TFQ+LMN++F+PYL+K
Sbjct: 650 KLDLRSGYHQIRVHEADIPKTAFRTHEGHYEFIVMPFGLTNAPTTFQSLMNDLFRPYLQK 709

Query: 15  YILVF 1
           +ILVF
Sbjct: 710 FILVF 714


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  216 bits (549), Expect = 2e-54
 Identities = 97/125 (77%), Positives = 115/125 (92%)
 Frame = -2

Query: 375  LIQPSHSPFASPILLVKKKDGSWRFCVDYRKLNDITIKDKFPIPVIDELLDELHGAKVFS 196
            +IQ SHS F+SP+LLVKKKDGSWRFCVDYR LN++T+ DK+PIP+IDELLDELHGA VFS
Sbjct: 651  IIQQSHSAFSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKYPIPIIDELLDELHGACVFS 710

Query: 195  KIDLRSSYHQIRVTEADIYKTAFRTHHGHYEFKVMPFGLTNAPATFQALMNEVFQPYLRK 16
            K+DL+S YHQI++  +D++KTAFRTH GHYEF VMPFGLTNAPATFQALMNEVF+PYLRK
Sbjct: 711  KLDLKSGYHQIKMKPSDVHKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNEVFKPYLRK 770

Query: 15   YILVF 1
            ++LVF
Sbjct: 771  FVLVF 775


>ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
          Length = 1049

 Score =  213 bits (542), Expect = 1e-53
 Identities = 96/125 (76%), Positives = 114/125 (91%)
 Frame = -2

Query: 375 LIQPSHSPFASPILLVKKKDGSWRFCVDYRKLNDITIKDKFPIPVIDELLDELHGAKVFS 196
           +I+PSHSP++SP+LLVKKKDG WRFCVDYRKLN +TI DKFPIPVI+ELLDELHGA VFS
Sbjct: 607 VIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTISDKFPIPVIEELLDELHGATVFS 666

Query: 195 KIDLRSSYHQIRVTEADIYKTAFRTHHGHYEFKVMPFGLTNAPATFQALMNEVFQPYLRK 16
           K+DL+S YHQIR+ + D+ KTAFRTH GHYEF VMPFGLTNAPATFQ+LMN+VF+P+LR+
Sbjct: 667 KLDLKSGYHQIRMHKEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRR 726

Query: 15  YILVF 1
            +LVF
Sbjct: 727 CVLVF 731


>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1548

 Score =  212 bits (539), Expect = 3e-53
 Identities = 94/125 (75%), Positives = 113/125 (90%)
 Frame = -2

Query: 375  LIQPSHSPFASPILLVKKKDGSWRFCVDYRKLNDITIKDKFPIPVIDELLDELHGAKVFS 196
            LI PS SPFASP+LLVKKKD SWRFCVDYR+LND+TIK+KFP+P++DELLDEL G + FS
Sbjct: 650  LISPSCSPFASPVLLVKKKDNSWRFCVDYRRLNDLTIKNKFPLPIVDELLDELAGTQFFS 709

Query: 195  KIDLRSSYHQIRVTEADIYKTAFRTHHGHYEFKVMPFGLTNAPATFQALMNEVFQPYLRK 16
            K+DLRS YHQIR+ E+D +KTAF+THHGH++F+VMPFGLTNAPATFQ LMN +F PYLRK
Sbjct: 710  KLDLRSGYHQIRMQESDEFKTAFKTHHGHFQFRVMPFGLTNAPATFQCLMNSIFAPYLRK 769

Query: 15   YILVF 1
            ++LVF
Sbjct: 770  FVLVF 774


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  209 bits (532), Expect = 2e-52
 Identities = 94/125 (75%), Positives = 113/125 (90%)
 Frame = -2

Query: 375 LIQPSHSPFASPILLVKKKDGSWRFCVDYRKLNDITIKDKFPIPVIDELLDELHGAKVFS 196
           +I+PSHS F+SP+LLVKKKDGSWRFCVDYR LN++T+ DK+PIPVIDELLDEL G+ VFS
Sbjct: 487 IIRPSHSAFSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKYPIPVIDELLDELQGSTVFS 546

Query: 195 KIDLRSSYHQIRVTEADIYKTAFRTHHGHYEFKVMPFGLTNAPATFQALMNEVFQPYLRK 16
           K+DL+S YHQI + + D+ KTAFRTH GHYEF VMPFGLTNAPATFQA+MN+VF+PYLRK
Sbjct: 547 KLDLKSGYHQILMKKEDVQKTAFRTHEGHYEFLVMPFGLTNAPATFQAVMNDVFRPYLRK 606

Query: 15  YILVF 1
           ++LVF
Sbjct: 607 FVLVF 611


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