BLASTX nr result

ID: Coptis25_contig00038783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038783
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275679.1| PREDICTED: probable glucuronoxylan glucurono...   270   2e-70
ref|XP_002523710.1| transferase, putative [Ricinus communis] gi|...   263   5e-68
ref|XP_002314302.1| predicted protein [Populus trichocarpa] gi|2...   262   8e-68
ref|XP_003539788.1| PREDICTED: probable glucuronoxylan glucurono...   257   2e-66
ref|XP_003538175.1| PREDICTED: probable glucuronoxylan glucurono...   251   1e-64

>ref|XP_002275679.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7
           [Vitis vinifera] gi|297734915|emb|CBI17149.3| unnamed
           protein product [Vitis vinifera]
          Length = 460

 Score =  270 bits (691), Expect = 2e-70
 Identities = 134/235 (57%), Positives = 173/235 (73%), Gaps = 5/235 (2%)
 Frame = -3

Query: 691 MVDFKRSTSINRGYYVKMKLLNNHGRTNTKSLFCYKYFKCVLWAXXXXXXXXXXXXXXXS 512
           MVDF R  S NRG+YV+M+LL+  GR      +C++YF+ VLW                 
Sbjct: 1   MVDFSRP-SRNRGFYVRMRLLHKQGRQEKS--YCFRYFRWVLWLSLSLYFFSSYLITNHP 57

Query: 511 NKQISLPKTNNFISK-SRALLES-NATVLQYPKAS---FNNMKIYVYNLPSSYNTDWLSN 347
            K  S+PK     SK SRAL E+ N T+ Q P+       ++K+Y+Y+LPS YN DWLSN
Sbjct: 58  RKLTSIPKVTVSNSKASRALFETVNTTIQQQPRDHQDLLKDLKVYIYDLPSKYNVDWLSN 117

Query: 346 KRCSSHLFAAEVAIHKALLNSDVRTVDPLQADFFFVPVYLSCNFSTVNGFPSMGHARPLL 167
           +RCS+HLFA+EVA+HKAL  SDVRT DP +ADFFFVPVY+SCNFSTVNGFP++GHARPLL
Sbjct: 118 ERCSNHLFASEVALHKALQESDVRTFDPWEADFFFVPVYVSCNFSTVNGFPAIGHARPLL 177

Query: 166 SSAVQLISSTMPFWNRTQGADHIFIASHDFGACFHSVEELAIADGIPEFMKNSIM 2
           +SA+Q IS+ +PFWNR+ GADH+F+ASHD+GACFH++E++A ADGIPEF+K SI+
Sbjct: 178 ASAIQHISTQLPFWNRSLGADHVFVASHDYGACFHAMEDVARADGIPEFLKKSII 232


>ref|XP_002523710.1| transferase, putative [Ricinus communis]
           gi|223537014|gb|EEF38650.1| transferase, putative
           [Ricinus communis]
          Length = 461

 Score =  263 bits (671), Expect = 5e-68
 Identities = 136/244 (55%), Positives = 170/244 (69%), Gaps = 14/244 (5%)
 Frame = -3

Query: 691 MVDFKRSTSINRGYYVKMKLLNNHGRTNT----KSLFCYKYFKCVLWAXXXXXXXXXXXX 524
           M +  + T  NRG+YVKMKL++ +GR       KS  C+KY+K VLW             
Sbjct: 1   MAELIKPTRKNRGFYVKMKLVHRNGRLQQQQLEKSNLCFKYYKWVLWISLSLYFITSYFI 60

Query: 523 XXXSNKQISLPKTNNFISK---SRALLES-NATVLQYPKASFN-----NMKIYVYNLPSS 371
               +K I L K   F      SRAL ES N+T    PK + N     ++KIY+Y LPS 
Sbjct: 61  S---HKPIPLSKAQYFSKSAVVSRALFESTNSTFFHQPKNNTNQALLKDLKIYIYELPSK 117

Query: 370 YNTDWLSNKRCSSHLFAAEVAIHKALLNSD-VRTVDPLQADFFFVPVYLSCNFSTVNGFP 194
           YN DWLSNKRCS+HLFA+EVAIHKA+ NSD +RT DP +ADFFFVPVY+SCNFST+NGFP
Sbjct: 118 YNRDWLSNKRCSNHLFASEVAIHKAISNSDDIRTFDPYEADFFFVPVYVSCNFSTINGFP 177

Query: 193 SMGHARPLLSSAVQLISSTMPFWNRTQGADHIFIASHDFGACFHSVEELAIADGIPEFMK 14
           ++GHAR LLSSAV  IS+  PFWNR+QGADH+F+ASHDFG+CFH++EE A+ DG+PEF+K
Sbjct: 178 AIGHARSLLSSAVTFISTNYPFWNRSQGADHVFVASHDFGSCFHTLEERAMQDGVPEFLK 237

Query: 13  NSIM 2
            SI+
Sbjct: 238 KSII 241


>ref|XP_002314302.1| predicted protein [Populus trichocarpa] gi|222850710|gb|EEE88257.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  262 bits (669), Expect = 8e-68
 Identities = 138/244 (56%), Positives = 176/244 (72%), Gaps = 14/244 (5%)
 Frame = -3

Query: 691 MVDFKRSTSIN--RGYYVKMKLLNNHG---RTNTKSLFCYKYFKCVLWAXXXXXXXXXXX 527
           +++ KR T  N  RG+YV+MKLL+ H    +   K   C+KY+K +LW            
Sbjct: 2   VLEVKRPTMSNNRRGFYVRMKLLHRHAGLQQQEKKKNLCFKYYKWLLW---FSLLLYFLS 58

Query: 526 XXXXSNKQISLPKTNNFISK---SRALLES-NATVLQYPK----ASFNNMKIYVYNLPSS 371
               ++K I L KT+   SK   SRAL ES N+T +Q  K        ++K+Y+Y LPS 
Sbjct: 59  SCFFTHKPIPLSKTHVSESKTVVSRALFESSNSTFIQQSKNINRGLLKDLKVYIYELPSK 118

Query: 370 YNTDWLSNKRCSSHLFAAEVAIHKALLNS-DVRTVDPLQADFFFVPVYLSCNFSTVNGFP 194
           YNTDWL+N+RCS+HLFA+EVAIHKAL NS D+RT DP +ADFFFVPVY+SCNFSTVNGFP
Sbjct: 119 YNTDWLANERCSNHLFASEVAIHKALSNSLDIRTFDPYEADFFFVPVYVSCNFSTVNGFP 178

Query: 193 SMGHARPLLSSAVQLISSTMPFWNRTQGADHIFIASHDFGACFHSVEELAIADGIPEFMK 14
           ++GHAR LLSSAVQLISS  PFWNR+QG+DH+F+ASHD+GACFH++EE A+ DGIPEF+K
Sbjct: 179 AIGHARSLLSSAVQLISSNYPFWNRSQGSDHVFVASHDYGACFHAMEERAMEDGIPEFLK 238

Query: 13  NSIM 2
            SI+
Sbjct: 239 RSII 242


>ref|XP_003539788.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like [Glycine max]
          Length = 461

 Score =  257 bits (657), Expect = 2e-66
 Identities = 130/236 (55%), Positives = 166/236 (70%), Gaps = 16/236 (6%)
 Frame = -3

Query: 661 NRGYYVKMKLLNNHGRTN------TKSLFCYKYFKCVLWAXXXXXXXXXXXXXXXSNKQI 500
           +RGYYVKMKLL+ HGR +       +    Y+Y+K VLW                    I
Sbjct: 9   SRGYYVKMKLLHKHGRPHHHHQQQQEKNCLYRYYKWVLWLSLSLYFFTSYL--------I 60

Query: 499 SLPKTNNFISK-----SRALLESNATVLQYPKA-----SFNNMKIYVYNLPSSYNTDWLS 350
           S    NN  SK     SRAL+ESN T     +A     S  N+K++VY+LP  YNTDWLS
Sbjct: 61  SNNNNNNHHSKQPSHVSRALMESNHTTPPQQQALNSLGSLKNLKVFVYDLPQKYNTDWLS 120

Query: 349 NKRCSSHLFAAEVAIHKALLNSDVRTVDPLQADFFFVPVYLSCNFSTVNGFPSMGHARPL 170
           N+RCS HLFA+EVAIH+ALL S+VRT DP  ADFFFVPVY+SCNFSTVNGFP++GHAR L
Sbjct: 121 NERCSKHLFASEVAIHRALLTSEVRTFDPYDADFFFVPVYVSCNFSTVNGFPAIGHARSL 180

Query: 169 LSSAVQLISSTMPFWNRTQGADHIFIASHDFGACFHSVEELAIADGIPEFMKNSIM 2
           ++SAV L+SS  PFWNR++G+DH+F+ASHDFG+CFH++E++A+ADG+PE M+NSI+
Sbjct: 181 IASAVSLVSSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMADGVPEIMRNSIV 236


>ref|XP_003538175.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like [Glycine max]
          Length = 460

 Score =  251 bits (641), Expect = 1e-64
 Identities = 126/233 (54%), Positives = 164/233 (70%), Gaps = 13/233 (5%)
 Frame = -3

Query: 661 NRGYYVKMKLLNNHGRTN--------TKSLFCYKYFKCVLWAXXXXXXXXXXXXXXXSNK 506
           +RGYYVKMKLL  HGR +         K+ F Y+Y+K VLW                +N 
Sbjct: 10  SRGYYVKMKLLQKHGRPHHHHHHHQQEKNCF-YRYYKWVLWLSLSLYFFTSYLISNNNNH 68

Query: 505 QISLPKTNNFISKSRALLESNATV-----LQYPKASFNNMKIYVYNLPSSYNTDWLSNKR 341
               P        SRAL++SN T      L  P+ S   +K++VY+LP  YNTDWL+N+R
Sbjct: 69  HTKKPS-----HVSRALIQSNHTTTPQHALNSPE-SLKKLKVFVYDLPPKYNTDWLTNER 122

Query: 340 CSSHLFAAEVAIHKALLNSDVRTVDPLQADFFFVPVYLSCNFSTVNGFPSMGHARPLLSS 161
           CS HLFA+EVAIH+ALL S+VRT DP  ADFFFVPVY+SCNFSTVNGFP++GHAR L++S
Sbjct: 123 CSKHLFASEVAIHRALLTSEVRTFDPYDADFFFVPVYVSCNFSTVNGFPAIGHARSLIAS 182

Query: 160 AVQLISSTMPFWNRTQGADHIFIASHDFGACFHSVEELAIADGIPEFMKNSIM 2
           AV LISS  PFWNR++G+DH+F+ASHDFG+CFH++E++A+ADG+PE ++NSI+
Sbjct: 183 AVNLISSEYPFWNRSRGSDHVFVASHDFGSCFHTLEDVAMADGVPEIVRNSIV 235


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